Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1503613Fold a.126: Serum albumin-like [48551] (1 superfamily)
    multihelical; one domain consists of two similar disulfide-linked subdomains
  4. 1503614Superfamily a.126.1: Serum albumin-like [48552] (2 families) (S)
  5. 1503945Family a.126.1.0: automated matches [254216] (1 protein)
    not a true family
  6. 1503946Protein automated matches [254493] (5 species)
    not a true protein

Species:

  1. 1503947Cow (Bos taurus) [TaxId:9913] [256128] (4 PDB entries)
    1. Domains for 3v03:
      1. 1503960Domain d3v03a1: 3v03 A:3-195 [250287]
        automated match to d3jrya1
        complexed with act, ca
      2. 1503961Domain d3v03a2: 3v03 A:196-387 [250288]
        automated match to d4l8ua2
        complexed with act, ca
      3. 1503962Domain d3v03a3: 3v03 A:388-583 [250289]
        automated match to d4emxa3
        complexed with act, ca
      4. 1503963Domain d3v03b1: 3v03 B:3-195 [250290]
        automated match to d3jrya1
        complexed with act, ca
      5. 1503964Domain d3v03b2: 3v03 B:196-387 [250291]
        automated match to d4l8ua2
        complexed with act, ca
      6. 1503965Domain d3v03b3: 3v03 B:388-583 [250292]
        automated match to d4emxa3
        complexed with act, ca
    2. Domains for 4f5s:
      1. 1503948Domain d4f5sa1: 4f5s A:1-195 [251885]
        automated match to d3jrya1
        complexed with pge
      2. 1503949Domain d4f5sa2: 4f5s A:196-387 [251886]
        automated match to d4l8ua2
        complexed with pge
      3. 1503950Domain d4f5sa3: 4f5s A:388-583 [251887]
        automated match to d4emxa3
        complexed with pge
      4. 1503951Domain d4f5sb1: 4f5s B:1-195 [251888]
        automated match to d3jrya1
        complexed with pge
      5. 1503952Domain d4f5sb2: 4f5s B:196-387 [251889]
        automated match to d4l8ua2
        complexed with pge
      6. 1503953Domain d4f5sb3: 4f5s B:388-583 [251890]
        automated match to d4emxa3
        complexed with pge
    3. Domains for 4jk4:
      1. 1503954Domain d4jk4a1: 4jk4 A:2-195 [252960]
        automated match to d3jrya1
        complexed with 1pe, ca, diu, peg, pge
      2. 1503955Domain d4jk4a2: 4jk4 A:196-387 [252961]
        automated match to d4l8ua2
        complexed with 1pe, ca, diu, peg, pge
      3. 1503956Domain d4jk4a3: 4jk4 A:388-583 [252962]
        automated match to d4emxa3
        complexed with 1pe, ca, diu, peg, pge
      4. 1503957Domain d4jk4b1: 4jk4 B:2-195 [252963]
        automated match to d3jrya1
        complexed with 1pe, ca, diu, peg, pge
      5. 1503958Domain d4jk4b2: 4jk4 B:196-387 [252964]
        automated match to d4l8ua2
        complexed with 1pe, ca, diu, peg, pge
      6. 1503959Domain d4jk4b3: 4jk4 B:388-583 [252965]
        automated match to d4emxa3
        complexed with 1pe, ca, diu, peg, pge
    4. Domains for 4or0:
      1. 1503966Domain d4or0a1: 4or0 A:2-195 [257314]
        automated match to d3uiva1
        complexed with nps, peg, pge
      2. 1503967Domain d4or0a2: 4or0 A:196-387 [257315]
        automated match to d3uiva1
        complexed with nps, peg, pge
      3. 1503968Domain d4or0a3: 4or0 A:388-583 [257316]
        automated match to d4l8ua3
        complexed with nps, peg, pge
      4. 1503969Domain d4or0b1: 4or0 B:2-195 [259437]
        automated match to d3uiva1
        complexed with nps, peg, pge
      5. 1503970Domain d4or0b2: 4or0 B:196-387 [259438]
        automated match to d3uiva1
        complexed with nps, peg, pge
      6. 1503971Domain d4or0b3: 4or0 B:388-583 [259439]
        automated match to d4l8ua3
        complexed with nps, peg, pge
  2. 1503972Horse (Equus caballus) [TaxId:9796] [256129] (5 PDB entries)
    1. Domains for 3v08:
      1. 1503982Domain d3v08a1: 3v08 A:3-195 [250293]
        automated match to d3jrya1
        complexed with br, edo, pg4, so4, unx
      2. 1503983Domain d3v08a2: 3v08 A:196-387 [250294]
        automated match to d4l8ua2
        complexed with br, edo, pg4, so4, unx
      3. 1503984Domain d3v08a3: 3v08 A:388-583 [250295]
        automated match to d4emxa3
        complexed with br, edo, pg4, so4, unx
    2. Domains for 4f5t:
      1. 1503979Domain d4f5ta1: 4f5t A:1-195 [251891]
        automated match to d3jrya1
        complexed with act, gol, so4
      2. 1503980Domain d4f5ta2: 4f5t A:196-387 [251892]
        automated match to d4l8ua2
        complexed with act, gol, so4
      3. 1503981Domain d4f5ta3: 4f5t A:388-583 [251893]
        automated match to d4emxa3
        complexed with act, gol, so4
    3. Domains for 4f5u:
      1. 1503976Domain d4f5ua1: 4f5u A:1-195 [251894]
        automated match to d3jrya1
        complexed with lmr, mli, sin
      2. 1503977Domain d4f5ua2: 4f5u A:196-387 [251895]
        automated match to d4l8ua2
        complexed with lmr, mli, sin
      3. 1503978Domain d4f5ua3: 4f5u A:388-583 [251896]
        automated match to d4emxa3
        complexed with lmr, mli, sin
    4. Domains for 4j2v:
      1. 1503973Domain d4j2va1: 4j2v A:3-195 [252812]
        automated match to d3jrya1
        complexed with act, diu, fmt, mli
      2. 1503974Domain d4j2va2: 4j2v A:196-387 [252813]
        automated match to d4l8ua2
        complexed with act, diu, fmt, mli
      3. 1503975Domain d4j2va3: 4j2v A:388-583 [252814]
        automated match to d4emxa3
        complexed with act, diu, fmt, mli
    5. Domains for 4ot2:
      1. 1503985Domain d4ot2a1: 4ot2 A:4-195 [257321]
        automated match to d1hk5a2
        complexed with act, mli, nps, sin
      2. 1503986Domain d4ot2a2: 4ot2 A:196-387 [257322]
        automated match to d1hk5a2
        complexed with act, mli, nps, sin
      3. 1503987Domain d4ot2a3: 4ot2 A:388-583 [257324]
        automated match to d1hk2a3
        complexed with act, mli, nps, sin
  3. 1503988Human (Homo sapiens) [TaxId:9606] [255068] (15 PDB entries)
    1. Domains for 2bxc:
      1. 1504038Domain d2bxca1: 2bxc A:197-388 [129409]
        automated match to d4l8ua2
        complexed with p1z
      2. 1504039Domain d2bxca2: 2bxc A:389-582 [129410]
        automated match to d4emxa3
        complexed with p1z
      3. 1504040Domain d2bxca3: 2bxc A:5-196 [238624]
        automated match to d3jrya1
        complexed with p1z
      4. 1504041Domain d2bxcb1: 2bxc B:197-388 [129411]
        automated match to d4l8ua2
        complexed with p1z
      5. 1504042Domain d2bxcb2: 2bxc B:389-582 [129412]
        automated match to d4emxa3
        complexed with p1z
      6. 1504043Domain d2bxcb3: 2bxc B:5-196 [238625]
        automated match to d3jrya1
        complexed with p1z
    2. Domains for 2bxd:
      1. 1504032Domain d2bxda1: 2bxd A:197-388 [129413]
        automated match to d4l8ua2
        complexed with rwf
      2. 1504033Domain d2bxda2: 2bxd A:389-582 [129414]
        automated match to d4emxa3
        complexed with rwf
      3. 1504034Domain d2bxda3: 2bxd A:5-196 [238626]
        automated match to d3jrya1
        complexed with rwf
      4. 1504035Domain d2bxdb1: 2bxd B:197-388 [129415]
        automated match to d4l8ua2
        complexed with rwf
      5. 1504036Domain d2bxdb2: 2bxd B:389-582 [129416]
        automated match to d4emxa3
        complexed with rwf
      6. 1504037Domain d2bxdb3: 2bxd B:5-196 [238627]
        automated match to d3jrya1
        complexed with rwf
    3. Domains for 2bxi:
      1. 1503995Domain d2bxia1: 2bxi A:197-388 [129429]
        automated match to d4l8ua2
        complexed with azq, myr
      2. 1503996Domain d2bxia2: 2bxi A:389-584 [129430]
        automated match to d4emxa3
        complexed with azq, myr
      3. 1503997Domain d2bxia3: 2bxi A:3-196 [238628]
        automated match to d3jrya1
        complexed with azq, myr
    4. Domains for 2bxk:
      1. 1503989Domain d2bxka1: 2bxk A:197-388 [129431]
        automated match to d4l8ua2
        complexed with azq, imn, myr
      2. 1503990Domain d2bxka2: 2bxk A:389-584 [129432]
        automated match to d4emxa3
        complexed with azq, imn, myr
      3. 1503991Domain d2bxka3: 2bxk A:3-196 [238629]
        automated match to d3jrya1
        complexed with azq, imn, myr
    5. Domains for 2bxq:
      1. 1503998Domain d2bxqa1: 2bxq A:197-388 [129443]
        automated match to d4l8ua2
        complexed with imn, myr, p1z
      2. 1503999Domain d2bxqa2: 2bxq A:389-584 [129444]
        automated match to d4emxa3
        complexed with imn, myr, p1z
      3. 1504000Domain d2bxqa3: 2bxq A:3-196 [238630]
        automated match to d3jrya1
        complexed with imn, myr, p1z
    6. Domains for 2vdb:
      1. 1504010Domain d2vdba1: 2vdb A:197-388 [152970]
        Other proteins in same PDB: d2vdbb_
        automated match to d4l8ua2
        complexed with dka, nps
      2. 1504011Domain d2vdba2: 2vdb A:389-584 [152971]
        Other proteins in same PDB: d2vdbb_
        automated match to d4emxa3
        complexed with dka, nps
      3. 1504012Domain d2vdba3: 2vdb A:6-196 [238888]
        Other proteins in same PDB: d2vdbb_
        automated match to d3jrya1
        complexed with dka, nps
    7. Domains for 2vuf:
      1. 1504022Domain d2vufa1: 2vuf A:5-196 [243945]
        automated match to d3jrya1
        complexed with fua
      2. 1504023Domain d2vufa2: 2vuf A:197-388 [243946]
        automated match to d4l8ua2
        complexed with fua
      3. 1504024Domain d2vufa3: 2vuf A:389-570 [243947]
        automated match to d4emxa3
        complexed with fua
      4. 1504025Domain d2vufb1: 2vuf B:5-196 [243948]
        automated match to d3jrya1
        complexed with fua
      5. 1504026Domain d2vufb2: 2vuf B:197-388 [243949]
        automated match to d4l8ua2
        complexed with fua
      6. 1504027Domain d2vufb3: 2vuf B:389-562 [243950]
        automated match to d4emxa3
        complexed with fua
    8. Domains for 2xsi:
      1. 1504004Domain d2xsia1: 2xsi A:3-196 [244582]
        automated match to d3jrya1
        complexed with 9ne, myr
      2. 1504005Domain d2xsia2: 2xsi A:197-388 [244583]
        automated match to d4l8ua2
        complexed with 9ne, myr
      3. 1504006Domain d2xsia3: 2xsi A:389-584 [244584]
        automated match to d4emxa3
        complexed with 9ne, myr
    9. Domains for 2xvv:
      1. 1503992Domain d2xvva1: 2xvv A:3-196 [244591]
        automated match to d3jrya1
        complexed with 9dn, myr
      2. 1503993Domain d2xvva2: 2xvv A:197-388 [244592]
        automated match to d4l8ua2
        complexed with 9dn, myr
      3. 1503994Domain d2xvva3: 2xvv A:389-584 [244593]
        automated match to d4emxa3
        complexed with 9dn, myr
    10. Domains for 2xvw:
      1. 1504001Domain d2xvwa1: 2xvw A:3-196 [244594]
        automated match to d3jrya1
        complexed with 9nr, myr
      2. 1504002Domain d2xvwa2: 2xvw A:197-388 [244595]
        automated match to d4l8ua2
        complexed with 9nr, myr
      3. 1504003Domain d2xvwa3: 2xvw A:389-584 [244596]
        automated match to d4emxa3
        complexed with 9nr, myr
    11. Domains for 3cx9:
      1. 1504019Domain d3cx9a1: 3cx9 A:3-196 [245570]
        automated match to d3jrya1
        complexed with lpx, myr
      2. 1504020Domain d3cx9a2: 3cx9 A:197-388 [245571]
        automated match to d4l8ua2
        complexed with lpx, myr
      3. 1504021Domain d3cx9a3: 3cx9 A:389-584 [245572]
        automated match to d4emxa3
        complexed with lpx, myr
    12. Domains for 3sqj:
      1. 1504013Domain d3sqja1: 3sqj A:3-196 [249564]
        automated match to d3jrya1
        complexed with myr
      2. 1504014Domain d3sqja2: 3sqj A:197-388 [249565]
        automated match to d4l8ua2
        complexed with myr
      3. 1504015Domain d3sqja3: 3sqj A:389-584 [249566]
        automated match to d4emxa3
        complexed with myr
      4. 1504016Domain d3sqjb1: 3sqj B:3-196 [249567]
        automated match to d3jrya1
        complexed with myr
      5. 1504017Domain d3sqjb2: 3sqj B:197-388 [249568]
        automated match to d4l8ua2
        complexed with myr
      6. 1504018Domain d3sqjb3: 3sqj B:389-584 [249569]
        automated match to d4emxa3
        complexed with myr
    13. Domains for 4bke:
      1. 1504007Domain d4bkea1: 4bke A:3-196 [251269]
        automated match to d3jrya1
        complexed with plm
      2. 1504008Domain d4bkea2: 4bke A:197-388 [251270]
        automated match to d4l8ua2
        complexed with plm
      3. 1504009Domain d4bkea3: 4bke A:389-584 [251271]
        automated match to d4emxa3
        complexed with plm
    14. Domains for 4hgk:
      1. 1504028Domain d4hgka1: 4hgk A:4-196 [252442]
        Other proteins in same PDB: d4hgkc_, d4hgkd_
        automated match to d3jrya1
      2. 1504029Domain d4hgka2: 4hgk A:197-388 [252443]
        Other proteins in same PDB: d4hgkc_, d4hgkd_
        automated match to d4l8ua2
      3. 1504030Domain d4hgkb1: 4hgk B:4-196 [252444]
        Other proteins in same PDB: d4hgkc_, d4hgkd_
        automated match to d3jrya1
      4. 1504031Domain d4hgkb2: 4hgk B:197-388 [252445]
        Other proteins in same PDB: d4hgkc_, d4hgkd_
        automated match to d4l8ua2
    15. Domains for 4n0f:
      1. 1504044Domain d4n0fd1: 4n0f D:3-196 [253845]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d3jrya1
      2. 1504045Domain d4n0fd2: 4n0f D:197-388 [253846]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d4l8ua2
      3. 1504046Domain d4n0fd3: 4n0f D:389-585 [253847]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d4emxa3
      4. 1504047Domain d4n0fg1: 4n0f G:3-196 [253851]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d3jrya1
      5. 1504048Domain d4n0fg2: 4n0f G:197-388 [253852]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d4l8ua2
      6. 1504049Domain d4n0fg3: 4n0f G:389-585 [253853]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d4emxa3
      7. 1504050Domain d4n0fj1: 4n0f J:3-196 [253857]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d3jrya1
      8. 1504051Domain d4n0fj2: 4n0f J:197-388 [253858]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d4l8ua2
      9. 1504052Domain d4n0fj3: 4n0f J:389-585 [253859]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d4emxa3
      10. 1504053Domain d4n0fm1: 4n0f M:3-196 [253863]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d3jrya1
      11. 1504054Domain d4n0fm2: 4n0f M:197-388 [253864]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d4l8ua2
      12. 1504055Domain d4n0fm3: 4n0f M:389-585 [253865]
        Other proteins in same PDB: d4n0fa1, d4n0fa2, d4n0fb_, d4n0fe1, d4n0fe2, d4n0ff_, d4n0fh1, d4n0fh2, d4n0fi_, d4n0fk1, d4n0fk2, d4n0fl_
        automated match to d4emxa3
  4. 1504056Ovis aries [TaxId:9940] [259659] (1 PDB entry)
  5. 1504060Rabbit (Oryctolagus cuniculus) [TaxId:9986] [256130] (3 PDB entries)
    1. Domains for 3v09:
      1. 1504061Domain d3v09a1: 3v09 A:1-196 [250296]
        automated match to d3jrya1
        complexed with cl, edo, mes, pg4, unk
      2. 1504062Domain d3v09a2: 3v09 A:197-388 [250297]
        automated match to d4l8ua2
        complexed with cl, edo, mes, pg4, unk
      3. 1504063Domain d3v09a3: 3v09 A:389-583 [250298]
        automated match to d4emxa3
        complexed with cl, edo, mes, pg4, unk
    2. Domains for 4f5v:
      1. 1504064Domain d4f5va1: 4f5v A:1-196 [251897]
        automated match to d3jrya1
        complexed with act, pg4, pge
      2. 1504065Domain d4f5va2: 4f5v A:197-388 [251898]
        automated match to d4l8ua2
        complexed with act, pg4, pge
      3. 1504066Domain d4f5va3: 4f5v A:389-584 [251899]
        automated match to d4emxa3
        complexed with act, pg4, pge
    3. Domains for 4po0:
      1. 1504067Domain d4po0a1: 4po0 A:2-196 [257518]
        automated match to d3uiva1
        complexed with nps
      2. 1504068Domain d4po0a2: 4po0 A:197-388 [257519]
        automated match to d3uiva1
        complexed with nps
      3. 1504069Domain d4po0a3: 4po0 A:389-584 [257520]
        automated match to d4l8ua3
        complexed with nps

More info for Protein automated matches from a.126.1.0: automated matches

Timeline for Protein automated matches from a.126.1.0: automated matches: