Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1999483Superfamily a.60.12: PsbU/PolX domain-like [81585] (3 families) (S)
    contains one classic and one pseudo HhH motifs
  5. 1999735Family a.60.12.0: automated matches [254215] (1 protein)
    not a true family
  6. 1999736Protein automated matches [254483] (3 species)
    not a true protein

Species:

  1. 1999737Human (Homo sapiens) [TaxId:9606] [255047] (5 PDB entries)
    1. Domain for 2bcr:
    2. Domain for 2bcs:
    3. Domain for 2bcu:
    4. Domain for 2bcv:
    5. Domain for 4lzd:
  2. 1999743Mouse (Mus musculus) [TaxId:10090] [255237] (29 PDB entries)
    1. Domains for 2ihm:
      1. 1999754Domain d2ihma2: 2ihm A:231-289 [242124]
        Other proteins in same PDB: d2ihma1, d2ihma3, d2ihmb1, d2ihmb3
        automated match to d1jmsa3
        protein/DNA complex; complexed with d3t, mg, na
      2. 1999755Domain d2ihmb2: 2ihm B:231-289 [242127]
        Other proteins in same PDB: d2ihma1, d2ihma3, d2ihmb1, d2ihmb3
        automated match to d1jmsa3
        protein/DNA complex; complexed with d3t, mg, na
    2. Domain for 4i27:
    3. Domain for 4i28:
    4. Domain for 4i29:
    5. Domain for 4i2a:
    6. Domain for 4i2b:
    7. Domain for 4i2c:
    8. Domain for 4i2d:
    9. Domain for 4i2e:
    10. Domain for 4i2f:
    11. Domain for 4i2g:
    12. Domain for 4i2h:
    13. Domain for 4i2i:
    14. Domain for 4i2j:
    15. Domain for 4iqt:
    16. Domain for 4iqu:
    17. Domain for 4iqv:
    18. Domain for 4iqw:
    19. Domain for 4qz8:
    20. Domain for 4qz9:
    21. Domain for 4qza:
    22. Domain for 4qzb:
    23. Domain for 4qzc:
    24. Domain for 4qzd:
    25. Domain for 4qze:
    26. Domain for 4qzf:
    27. Domain for 4qzg:
    28. Domain for 4qzh:
    29. Domain for 4qzi:
  3. 1999774Norway rat (Rattus norvegicus) [TaxId:10116] [255607] (2 PDB entries)
    1. Domains for 1cf6:
      1. 1999776Domain d1cf6a4: 1cf6 A:92-148 [302273]
        Other proteins in same PDB: d1cf6a3, d1cf6a5, d1cf6b3, d1cf6b5
        automated match to d4klia2
        protein/DNA complex; complexed with cr, ucp
      2. 1999777Domain d1cf6b4: 1cf6 B:92-148 [302276]
        Other proteins in same PDB: d1cf6a3, d1cf6a5, d1cf6b3, d1cf6b5
        automated match to d4klia2
        protein/DNA complex; complexed with cr, ucp
    2. Domain for 2van:

More info for Protein automated matches from a.60.12.0: automated matches

Timeline for Protein automated matches from a.60.12.0: automated matches: