Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2014239Fold a.177: Sigma2 domain of RNA polymerase sigma factors [88945] (1 superfamily)
    multihelical; consists of a conserved 4-helical core and a variable insert subdomain
  4. 2014240Superfamily a.177.1: Sigma2 domain of RNA polymerase sigma factors [88946] (2 families) (S)
  5. 2014241Family a.177.1.1: Sigma2 domain of RNA polymerase sigma factors [88947] (6 protein domains)
  6. 2014283Protein automated matches [254474] (3 species)
    not a true protein

Species:

  1. 2014284Thermus thermophilus HB8 [TaxId:300852] [255803] (1 PDB entry)
  2. Thermus thermophilus [TaxId:274] [255020] (2 PDB entries)
    1. Domains for 1zyr:
      1. 2014288Domain d1zyrf3: 1zyr F:74-257 [125858]
        Other proteins in same PDB: d1zyra1, d1zyra2, d1zyrb1, d1zyrb2, d1zyrc_, d1zyrd_, d1zyre_, d1zyrf1, d1zyrf2, d1zyrk1, d1zyrk2, d1zyrl1, d1zyrl2, d1zyrm_, d1zyrn_, d1zyro_, d1zyrp1, d1zyrp2
        automated match to d1smyf3
        protein/RNA complex; complexed with mg, std, zn
      2. 2014289Domain d1zyrp3: 1zyr P:74-257 [125868]
        Other proteins in same PDB: d1zyra1, d1zyra2, d1zyrb1, d1zyrb2, d1zyrc_, d1zyrd_, d1zyre_, d1zyrf1, d1zyrf2, d1zyrk1, d1zyrk2, d1zyrl1, d1zyrl2, d1zyrm_, d1zyrn_, d1zyro_, d1zyrp1, d1zyrp2
        automated match to d1smyf3
        protein/RNA complex; complexed with mg, std, zn
    2. Domain for 5tmf:
  3. 2014290Thermus thermophilus [TaxId:300852] [258305] (2 PDB entries)
    1. Domain for 4q4z:
    2. Domain for 4q5s:

More info for Protein automated matches from a.177.1.1: Sigma2 domain of RNA polymerase sigma factors

Timeline for Protein automated matches from a.177.1.1: Sigma2 domain of RNA polymerase sigma factors: