SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class b: All beta proteins [48724] (176 folds)
Fold b.3: Prealbumin-like [49451] (7 superfamilies)
sandwich; 7 strands in 2 sheets, greek-key
variations: some members have additional 1-2 strands to common fold
Superfamily b.3.1: Starch-binding domain-like [49452] (4 families)
Family b.3.1.0: automated matches [254199] (1 protein)
not a true family
Protein automated matches [254436] (4 species)
not a true protein

Species:

Bacillus cereus [TaxId:1396] [254918] (3 PDB entries)
1. Domain for 1ven:
  - Domain d1vena1: 1ven A:418-516 [120023]
    Other proteins in same PDB: d1vena2
    automated match to d1vema1
    complexed with ca, glc
2. Domain for 1veo:
  - Domain d1veoa1: 1veo A:418-516 [120025]
    Other proteins in same PDB: d1veoa2
    automated match to d1vema1
    complexed with ca, glc
3. Domain for 1vep:
  - Domain d1vepa1: 1vep A:418-516 [120027]
    Other proteins in same PDB: d1vepa2
    automated match to d1vema1
    complexed with ca
Bacillus clarkii [TaxId:79879] [256325] (1 PDB entry)
- Domain for 4jcm:
  - Domain d4jcma4: 4jcm A:569-674 [252889]
    Other proteins in same PDB: d4jcma1, d4jcma2, d4jcma3
    automated match to d1cyga2
    complexed with ca, cl, edo, gol, na, so4
Fungus (Aspergillus aculeatus) [TaxId:5053] [255686] (1 PDB entry)
- Domains for 2xhn:
  1. Domain d2xhna2: 2xhn A:251-337 [244512]
    Other proteins in same PDB: d2xhna1, d2xhna3, d2xhnb1, d2xhnb3
    automated match to d1nkga1
    complexed with ca, edo, so4; mutant
  2. Domain d2xhnb2: 2xhn B:251-337 [244515]
    Other proteins in same PDB: d2xhna1, d2xhna3, d2xhnb1, d2xhnb3
    automated match to d1nkga1
    complexed with ca, edo, so4; mutant
Paenibacillus macerans [TaxId:44252] [256326] (2 PDB entries)
1. Domain for 3wms:
  - Domain d3wmsa4: 3wms A:616-716 [261013]
    Other proteins in same PDB: d3wmsa1, d3wmsa2, d3wmsa3
    automated match to d4jcla4
    complexed with ca; mutant
2. Domain for 4jcl:
  - Domain d4jcla4: 4jcl A:585-687 [252885]
    Other proteins in same PDB: d4jcla1, d4jcla2, d4jcla3
    automated match to d3cgta2
    complexed with ca, cl, edo, gol, peg, pge

More info for Protein automated matches from b.3.1.0: automated matches

Timeline for Protein automated matches from b.3.1.0: automated matches:

Protein automated matches from b.3.1.0: automated matches first appeared in SCOPe 2.04
Protein automated matches from b.3.1.0: automated matches appears in SCOPe 2.06
Protein automated matches from b.3.1.0: automated matches appears in the current release, SCOPe 2.08