Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1986009Fold a.11: Acyl-CoA binding protein-like [47026] (2 superfamilies)
    core: 3 helices; bundle, closed, left-handed twist; up-and-down
  4. 1986048Superfamily a.11.2: Second domain of FERM [47031] (2 families) (S)
    automatically mapped to Pfam PF00373
  5. 1986124Family a.11.2.0: automated matches [254193] (1 protein)
    not a true family
  6. 1986125Protein automated matches [254423] (3 species)
    not a true protein

Species:

  1. 1986126Chicken (Gallus gallus) [TaxId:9031] [254874] (2 PDB entries)
    1. Domain for 2j0m:
    2. Domain for 3zdt:
  2. 1986129Human (Homo sapiens) [TaxId:9606] [255207] (7 PDB entries)
    1. Domain for 2he7:
    2. Domains for 3qij:
      1. 1986130Domain d3qija2: 3qij A:291-396 [248903]
        Other proteins in same PDB: d3qija1, d3qija3, d3qija4, d3qijb1, d3qijb3, d3qijb4
        automated match to d1gg3a1
        complexed with unx
      2. 1986131Domain d3qijb2: 3qij B:291-396 [248906]
        Other proteins in same PDB: d3qija1, d3qija3, d3qija4, d3qijb1, d3qijb3, d3qijb4
        automated match to d1gg3a1
        complexed with unx
    3. Domain for 3u8z:
    4. Domains for 4ny0:
      1. 1986137Domain d4ny0a2: 4ny0 A:131-253 [254032]
        Other proteins in same PDB: d4ny0a1, d4ny0a3, d4ny0b1, d4ny0b3, d4ny0d1, d4ny0d3
        automated match to d2al6a1
      2. 1986138Domain d4ny0b2: 4ny0 B:131-253 [254035]
        Other proteins in same PDB: d4ny0a1, d4ny0a3, d4ny0b1, d4ny0b3, d4ny0d1, d4ny0d3
        automated match to d2al6a1
      3. 1986139Domain d4ny0d2: 4ny0 D:131-253 [254038]
        Other proteins in same PDB: d4ny0a1, d4ny0a3, d4ny0b1, d4ny0b3, d4ny0d1, d4ny0d3
        automated match to d2al6a1
    5. Domains for 4rma:
      1. 1986133Domain d4rmaa2: 4rma A:88-198 [309471]
        Other proteins in same PDB: d4rmaa1, d4rmaa3, d4rmab1, d4rmab3
        automated match to d2zpya1
        complexed with so4
      2. 1986134Domain d4rmab2: 4rma B:88-198 [309474]
        Other proteins in same PDB: d4rmaa1, d4rmaa3, d4rmab1, d4rmab3
        automated match to d2zpya1
        complexed with so4
    6. Domains for 4zri:
      1. 1986140Domain d4zria2: 4zri A:104-214 [274141]
        Other proteins in same PDB: d4zria1, d4zria3, d4zrib1, d4zrib3
        automated match to d1h4ra1
      2. 1986141Domain d4zrib2: 4zri B:104-214 [274138]
        Other proteins in same PDB: d4zria1, d4zria3, d4zrib1, d4zrib3
        automated match to d1h4ra1
    7. Domain for 4zrj:
  3. 1986142Mouse (Mus musculus) [TaxId:10090] [255101] (4 PDB entries)
    1. Domains for 2d2q:
      1. 1986153Domain d2d2qa1: 2d2q A:88-198 [131182]
        Other proteins in same PDB: d2d2qa2, d2d2qa3, d2d2qb2, d2d2qb3
        automated match to d2zpya1
      2. 1986154Domain d2d2qb1: 2d2q B:88-198 [131185]
        Other proteins in same PDB: d2d2qa2, d2d2qa3, d2d2qb2, d2d2qb3
        automated match to d2zpya1
    2. Domains for 3wa0:
      1. 1986143Domain d3wa0a2: 3wa0 A:104-214 [256458]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      2. 1986144Domain d3wa0b2: 3wa0 B:104-214 [262355]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      3. 1986145Domain d3wa0c2: 3wa0 C:104-214 [262358]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      4. 1986146Domain d3wa0d2: 3wa0 D:104-214 [262361]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      5. 1986147Domain d3wa0e2: 3wa0 E:104-214 [262364]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      6. 1986148Domain d3wa0f2: 3wa0 F:104-214 [262367]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
    3. Domains for 4p7i:
      1. 1986155Domain d4p7ia2: 4p7i A:104-214 [259915]
        Other proteins in same PDB: d4p7ia1, d4p7ia3, d4p7ib1, d4p7ib3
        automated match to d1h4ra1
        complexed with gol
      2. 1986156Domain d4p7ib2: 4p7i B:104-214 [263443]
        Other proteins in same PDB: d4p7ia1, d4p7ia3, d4p7ib1, d4p7ib3
        automated match to d1h4ra1
        complexed with gol
    4. Domains for 4zrk:
      1. 1986149Domain d4zrka2: 4zrk A:104-214 [274131]
        Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
        automated match to d1h4ra1
      2. 1986150Domain d4zrkb2: 4zrk B:104-214 [274121]
        Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
        automated match to d1h4ra1
      3. 1986151Domain d4zrkc2: 4zrk C:104-214 [274124]
        Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
        automated match to d1h4ra1
      4. 1986152Domain d4zrkd2: 4zrk D:104-214 [274127]
        Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
        automated match to d1h4ra1

More info for Protein automated matches from a.11.2.0: automated matches

Timeline for Protein automated matches from a.11.2.0: automated matches: