Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2697426Fold a.11: Acyl-CoA binding protein-like [47026] (2 superfamilies)
    core: 3 helices; bundle, closed, left-handed twist; up-and-down
  4. 2697469Superfamily a.11.2: Second domain of FERM [47031] (2 families) (S)
    automatically mapped to Pfam PF00373
  5. 2697545Family a.11.2.0: automated matches [254193] (1 protein)
    not a true family
  6. 2697546Protein automated matches [254423] (5 species)
    not a true protein

Species:

  1. 2697547Chicken (Gallus gallus) [TaxId:9031] [254874] (2 PDB entries)
    1. Domain for 2j0m:
    2. Domain for 3zdt:
  2. 2697550Fruit fly (Drosophila melanogaster) [TaxId:7227] [403237] (1 PDB entry)
  3. 2697553Human (Homo sapiens) [TaxId:9606] [255207] (60 PDB entries)
    1. Domain for 2he7:
    2. Domains for 3qij:
      1. 2697608Domain d3qija2: 3qij A:291-396 [248903]
        Other proteins in same PDB: d3qija1, d3qija3, d3qija4, d3qijb1, d3qijb3, d3qijb4
        automated match to d1gg3a1
        complexed with unx
      2. 2697609Domain d3qijb2: 3qij B:291-396 [248906]
        Other proteins in same PDB: d3qija1, d3qija3, d3qija4, d3qijb1, d3qijb3, d3qijb4
        automated match to d1gg3a1
        complexed with unx
    3. Domain for 3u8z:
    4. Domains for 4ny0:
      1. 2697612Domain d4ny0a2: 4ny0 A:131-253 [254032]
        Other proteins in same PDB: d4ny0a1, d4ny0a3, d4ny0b1, d4ny0b3, d4ny0d1, d4ny0d3
        automated match to d2al6a1
      2. 2697613Domain d4ny0b2: 4ny0 B:131-253 [254035]
        Other proteins in same PDB: d4ny0a1, d4ny0a3, d4ny0b1, d4ny0b3, d4ny0d1, d4ny0d3
        automated match to d2al6a1
      3. 2697614Domain d4ny0d2: 4ny0 D:131-253 [254038]
        Other proteins in same PDB: d4ny0a1, d4ny0a3, d4ny0b1, d4ny0b3, d4ny0d1, d4ny0d3
        automated match to d2al6a1
    5. Domains for 4rma:
      1. 2697606Domain d4rmaa2: 4rma A:88-198 [309471]
        Other proteins in same PDB: d4rmaa1, d4rmaa3, d4rmab1, d4rmab3
        automated match to d2zpya1
        complexed with so4
      2. 2697607Domain d4rmab2: 4rma B:88-198 [309474]
        Other proteins in same PDB: d4rmaa1, d4rmaa3, d4rmab1, d4rmab3
        automated match to d2zpya1
        complexed with so4
    6. Domains for 4zri:
      1. 2697618Domain d4zria2: 4zri A:104-214 [274141]
        Other proteins in same PDB: d4zria1, d4zria3, d4zrib1, d4zrib3
        automated match to d1h4ra1
      2. 2697619Domain d4zrib2: 4zri B:104-214 [274138]
        Other proteins in same PDB: d4zria1, d4zria3, d4zrib1, d4zrib3
        automated match to d1h4ra1
    7. Domain for 4zrj:
    8. Domain for 5rym:
    9. Domain for 5ryn:
    10. Domain for 5ryo:
    11. Domain for 5ryp:
    12. Domain for 5ryq:
    13. Domain for 5ryr:
    14. Domain for 5rys:
    15. Domain for 5ryt:
    16. Domain for 5ryu:
    17. Domain for 5ryv:
    18. Domain for 5ryw:
    19. Domain for 5ryx:
    20. Domain for 5ryy:
    21. Domain for 5ryz:
    22. Domain for 5rz0:
    23. Domain for 5rz1:
    24. Domain for 5rz2:
    25. Domain for 5rz3:
    26. Domain for 5rz4:
    27. Domain for 5rz5:
    28. Domain for 5rz6:
    29. Domain for 5rz7:
    30. Domain for 5rz8:
    31. Domain for 5rz9:
    32. Domain for 5rza:
    33. Domain for 5rzb:
    34. Domain for 5rzc:
    35. Domain for 5rzd:
    36. Domain for 5rze:
    37. Domain for 5rzf:
    38. Domain for 5rzg:
    39. Domain for 5rzh:
    40. Domain for 5rzi:
    41. Domain for 5rzj:
    42. Domain for 5rzk:
    43. Domain for 5rzl:
    44. Domain for 5rzm:
    45. Domain for 5rzn:
    46. Domain for 5rzo:
    47. Domain for 5rzp:
    48. Domain for 5rzq:
    49. Domain for 5rzr:
    50. Domain for 5rzs:
    51. Domain for 5rzt:
    52. Domain for 5rzu:
    53. Domain for 5rzv:
    54. Domain for 5rzw:
    55. Domain for 5rzx:
    56. Domain for 5rzy:
    57. Domain for 5rzz:
    58. Domain for 5s00:
    59. Domains for 6cds:
      1. 2697615Domain d6cdsa2: 6cds A:104-214 [354849]
        Other proteins in same PDB: d6cdsa1, d6cdsa3, d6cdsb1, d6cdsb3
        automated match to d1isna1
        complexed with gol, peg, pio, po4
      2. 2697616Domain d6cdsb2: 6cds B:104-214 [354848]
        Other proteins in same PDB: d6cdsa1, d6cdsa3, d6cdsb1, d6cdsb3
        automated match to d1isna1
        complexed with gol, peg, pio, po4
    60. Domain for 6ibe:
  4. 2697620Mouse (Mus musculus) [TaxId:10090] [255101] (5 PDB entries)
    1. Domains for 2d2q:
      1. 2697632Domain d2d2qa1: 2d2q A:88-198 [131182]
        Other proteins in same PDB: d2d2qa2, d2d2qa3, d2d2qb2, d2d2qb3
        automated match to d2zpya1
      2. 2697633Domain d2d2qb1: 2d2q B:88-198 [131185]
        Other proteins in same PDB: d2d2qa2, d2d2qa3, d2d2qb2, d2d2qb3
        automated match to d2zpya1
    2. Domains for 3wa0:
      1. 2697622Domain d3wa0a2: 3wa0 A:104-214 [256458]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      2. 2697623Domain d3wa0b2: 3wa0 B:104-214 [262355]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      3. 2697624Domain d3wa0c2: 3wa0 C:104-214 [262358]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      4. 2697625Domain d3wa0d2: 3wa0 D:104-214 [262361]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      5. 2697626Domain d3wa0e2: 3wa0 E:104-214 [262364]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
      6. 2697627Domain d3wa0f2: 3wa0 F:104-214 [262367]
        Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
        automated match to d1h4ra1
    3. Domains for 4p7i:
      1. 2697634Domain d4p7ia2: 4p7i A:104-214 [259915]
        Other proteins in same PDB: d4p7ia1, d4p7ia3, d4p7ib1, d4p7ib3
        automated match to d1h4ra1
        complexed with gol
      2. 2697635Domain d4p7ib2: 4p7i B:104-214 [263443]
        Other proteins in same PDB: d4p7ia1, d4p7ia3, d4p7ib1, d4p7ib3
        automated match to d1h4ra1
        complexed with gol
    4. Domains for 4zrk:
      1. 2697628Domain d4zrka2: 4zrk A:104-214 [274131]
        Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
        automated match to d1h4ra1
      2. 2697629Domain d4zrkb2: 4zrk B:104-214 [274121]
        Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
        automated match to d1h4ra1
      3. 2697630Domain d4zrkc2: 4zrk C:104-214 [274124]
        Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
        automated match to d1h4ra1
      4. 2697631Domain d4zrkd2: 4zrk D:104-214 [274127]
        Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
        automated match to d1h4ra1
    5. Domain for 6d2k:
  5. 2697636Zebrafish (Danio rerio) [TaxId:7955] [354854] (2 PDB entries)
    1. Domain for 6d21:
    2. Domain for 6d2q:

More info for Protein automated matches from a.11.2.0: automated matches

Timeline for Protein automated matches from a.11.2.0: automated matches: