Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies) core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest |
Superfamily c.52.1: Restriction endonuclease-like [52980] (36 families) |
Family c.52.1.34: PA N-terminal domain [254166] (2 proteins) Pfam PF00603; relationship to endonucleases discussed in PubMed 19194458 |
Protein PA N-terminal domain [254375] (5 species) |
Influenza a virus (a/lima/wrair1695p/2009(h1n1)) [TaxId:985958] [256341] (11 PDB entries) |
Domain d4kila1: 4kil A:1-195 [253267] Other proteins in same PDB: d4kila2 automated match to d3ebja_ complexed with 1r5, edo, mn, so4 |
Domain d4ln7a1: 4ln7 A:1-197 [253630] Other proteins in same PDB: d4ln7a2 automated match to d3ebja_ protein/RNA complex; complexed with 1zq, edo, mg, mn, so4 |
Domain d4m4qa1: 4m4q A:1-195 [253741] Other proteins in same PDB: d4m4qa2 automated match to d3ebja_ protein/RNA complex; complexed with 21a, mg, mn, so4 |
Domain d4m5oa1: 4m5o A:1-195 [253752] Other proteins in same PDB: d4m5oa2 automated match to d3ebja_ protein/RNA complex; complexed with edo, mn, so4, x48 |
Domain d4m5qa1: 4m5q A:1-196 [253753] Other proteins in same PDB: d4m5qa2 automated match to d3ebja_ complexed with edo, mn |
Domain d4m5ra1: 4m5r A:1-196 [253754] Other proteins in same PDB: d4m5ra2 automated match to d3ebja_ protein/RNA complex; complexed with edo, mn, msr, so4 |
Domain d4m5ua1: 4m5u A:1-195 [253755] Other proteins in same PDB: d4m5ua2 automated match to d3ebja_ protein/RNA complex; complexed with 20f, mn, so4 |
Domain d4m5va1: 4m5v A:1-195 [253756] Other proteins in same PDB: d4m5va2 automated match to d3ebja_ complexed with ca, so4 |
Domain d4mk1a1: 4mk1 A:1-195 [253800] Other proteins in same PDB: d4mk1a2 automated match to d3ebja_ protein/RNA complex; complexed with 27y, edo, mn, so4 |
Domain d4mk2a1: 4mk2 A:1-195 [253801] Other proteins in same PDB: d4mk2a2 automated match to d3ebja_ protein/RNA complex; complexed with 28b, edo, mn, so4 |
Domain d4mk5a1: 4mk5 A:1-195 [253802] Other proteins in same PDB: d4mk5a2 automated match to d3ebja_ protein/RNA complex; complexed with 28a, edo, mn, so4 |
Influenza a virus (strain a/puerto rico/8/1934 h1n1) [TaxId:211044] [272056] (5 PDB entries) |
Domain d4yyla1: 4yyl A:1-196 [272057] Other proteins in same PDB: d4yyla2 automated match to d4e5ed_ complexed with 4kn, mn, so4 |
Domain d4zhza1: 4zhz A:1-196 [272794] Other proteins in same PDB: d4zhza2 automated match to d4e5ed_ complexed with 4p8, mn, so4 |
Domain d4zi0a1: 4zi0 A:1-196 [272793] Other proteins in same PDB: d4zi0a2 automated match to d4e5ed_ complexed with 4p9, mn, so4 |
Domain d4zqqa1: 4zqq A:1-196 [273590] Other proteins in same PDB: d4zqqa2 automated match to d4e5ed_ complexed with mn, so4 |
Domain d5fdea1: 5fde A:1-196 [280155] Other proteins in same PDB: d5fdea2 automated match to d4e5ed_ complexed with 4p9, mn, so4 |
Influenza a virus [TaxId:1305075] [280128] (1 PDB entry) |
Domain d5cxra1: 5cxr A:1-196 [280129] Other proteins in same PDB: d5cxra2 automated match to d4ln7a_ complexed with byz, edo, mn, so4 |
Influenza a virus [TaxId:387207] [260115] (1 PDB entry) |
Domain d4w9sa1: 4w9s A:1-195 [260116] Other proteins in same PDB: d4w9sa2 automated match to d4ln7a_ protein/RNA complex; complexed with 3k1, mn, so4 |
Influenza A virus [TaxId:93838] [254808] (31 PDB entries) |
Domain d3ebja1: 3ebj A:1-197 [245817] Other proteins in same PDB: d3ebja2, d3ebjb2, d3ebjc2, d3ebjd2 complexed with mg |
Domain d3ebjb1: 3ebj B:1-195 [245818] Other proteins in same PDB: d3ebja2, d3ebjb2, d3ebjc2, d3ebjd2 complexed with mg |
Domain d3ebjc1: 3ebj C:1-197 [245819] Other proteins in same PDB: d3ebja2, d3ebjb2, d3ebjc2, d3ebjd2 complexed with mg |
Domain d3ebjd1: 3ebj D:1-197 [245820] Other proteins in same PDB: d3ebja2, d3ebjb2, d3ebjc2, d3ebjd2 complexed with mg |
Domain d3hw3a1: 3hw3 A:1-198 [246582] Other proteins in same PDB: d3hw3a2, d3hw3b2, d3hw3c2, d3hw3d2 automated match to d3ebja_ complexed with mg, u5p |
Domain d3hw3b1: 3hw3 B:1-197 [246583] Other proteins in same PDB: d3hw3a2, d3hw3b2, d3hw3c2, d3hw3d2 automated match to d3ebja_ complexed with mg, u5p |
Domain d3hw3c1: 3hw3 C:1-197 [246584] Other proteins in same PDB: d3hw3a2, d3hw3b2, d3hw3c2, d3hw3d2 automated match to d3ebja_ complexed with mg, u5p |
Domain d3hw3d1: 3hw3 D:1-197 [246585] Other proteins in same PDB: d3hw3a2, d3hw3b2, d3hw3c2, d3hw3d2 automated match to d3ebja_ complexed with mg, u5p |
Domain d3hw4a1: 3hw4 A:1-198 [246586] Other proteins in same PDB: d3hw4a2, d3hw4b2, d3hw4c2, d3hw4d2 automated match to d3ebja_ complexed with mg, tmp |
Domain d3hw4b1: 3hw4 B:1-197 [246587] Other proteins in same PDB: d3hw4a2, d3hw4b2, d3hw4c2, d3hw4d2 automated match to d3ebja_ complexed with mg, tmp |
Domain d3hw4c1: 3hw4 C:1-197 [246588] Other proteins in same PDB: d3hw4a2, d3hw4b2, d3hw4c2, d3hw4d2 automated match to d3ebja_ complexed with mg, tmp |
Domain d3hw4d1: 3hw4 D:1-197 [246589] Other proteins in same PDB: d3hw4a2, d3hw4b2, d3hw4c2, d3hw4d2 automated match to d3ebja_ complexed with mg, tmp |
Domain d3hw5a1: 3hw5 A:1-198 [246590] Other proteins in same PDB: d3hw5a2, d3hw5b2, d3hw5c2, d3hw5d2 automated match to d3ebja_ complexed with amp, mg |
Domain d3hw5b1: 3hw5 B:1-197 [246591] Other proteins in same PDB: d3hw5a2, d3hw5b2, d3hw5c2, d3hw5d2 automated match to d3ebja_ complexed with amp, mg |
Domain d3hw5c1: 3hw5 C:1-197 [246592] Other proteins in same PDB: d3hw5a2, d3hw5b2, d3hw5c2, d3hw5d2 automated match to d3ebja_ complexed with amp, mg |
Domain d3hw5d1: 3hw5 D:1-197 [246593] Other proteins in same PDB: d3hw5a2, d3hw5b2, d3hw5c2, d3hw5d2 automated match to d3ebja_ complexed with amp, mg |
Domain d3hw6a1: 3hw6 A:1-197 [246594] Other proteins in same PDB: d3hw6a2, d3hw6b2, d3hw6c2, d3hw6d2 automated match to d3ebja_ complexed with mn |
Domain d3hw6b1: 3hw6 B:1-197 [246595] Other proteins in same PDB: d3hw6a2, d3hw6b2, d3hw6c2, d3hw6d2 automated match to d3ebja_ complexed with mn |
Domain d3hw6c1: 3hw6 C:1-197 [246596] Other proteins in same PDB: d3hw6a2, d3hw6b2, d3hw6c2, d3hw6d2 automated match to d3ebja_ complexed with mn |
Domain d3hw6d1: 3hw6 D:1-197 [246597] Other proteins in same PDB: d3hw6a2, d3hw6b2, d3hw6c2, d3hw6d2 automated match to d3ebja_ complexed with mn |
Domain d4e5ea_: 4e5e A: [251665] automated match to d3ebja_ complexed with mn, so4 |
Domain d4e5eb_: 4e5e B: [251666] automated match to d3ebja_ complexed with mn, so4 |
Domain d4e5ec_: 4e5e C: [251667] automated match to d3ebja_ complexed with mn, so4 |
Domain d4e5ed_: 4e5e D: [251668] automated match to d3ebja_ complexed with mn, so4 |
Domain d4e5fa_: 4e5f A: [251669] automated match to d3ebja_ complexed with 0n7, mn, so4 |
Domain d4e5fb_: 4e5f B: [251670] automated match to d3ebja_ complexed with 0n7, mn, so4 |
Domain d4e5fc_: 4e5f C: [251671] automated match to d3ebja_ complexed with 0n7, mn, so4 |
Domain d4e5fd_: 4e5f D: [251672] automated match to d3ebja_ complexed with 0n7, mn, so4 |
Domain d4e5ga_: 4e5g A: [251673] automated match to d3ebja_ complexed with mn, so4, xi7 |
Domain d4e5gb_: 4e5g B: [251674] automated match to d3ebja_ complexed with mn, so4, xi7 |
Domain d4e5gc_: 4e5g C: [251675] automated match to d3ebja_ complexed with mn, so4, xi7 |
Domain d4e5gd_: 4e5g D: [251676] automated match to d3ebja_ complexed with mn, so4, xi7 |
Domain d4e5ha_: 4e5h A: [251677] automated match to d3ebja_ complexed with 0n8, mn, so4 |
Domain d4e5hb_: 4e5h B: [251678] automated match to d3ebja_ complexed with 0n8, mn, so4 |
Domain d4e5hc_: 4e5h C: [251679] automated match to d3ebja_ complexed with 0n8, mn, so4 |
Domain d4e5hd_: 4e5h D: [251680] automated match to d3ebja_ complexed with 0n8, mn, so4 |
Domain d4e5ia_: 4e5i A: [251681] automated match to d3ebja_ complexed with 0n9, mn, so4 |
Domain d4e5ib_: 4e5i B: [251682] automated match to d3ebja_ complexed with 0n9, mn, so4 |
Domain d4e5ic_: 4e5i C: [251683] automated match to d3ebja_ complexed with 0n9, mn, so4 |
Domain d4e5id_: 4e5i D: [251684] automated match to d3ebja_ complexed with 0n9, mn, so4 |
Domain d4e5ja1: 4e5j A:1-199 [251685] Other proteins in same PDB: d4e5ja2 automated match to d3ebja_ complexed with 581, mn, so4 |
Domain d4e5jb_: 4e5j B: [251686] Other proteins in same PDB: d4e5ja2 automated match to d3ebja_ complexed with 581, mn, so4 |
Domain d4e5jc_: 4e5j C: [251687] Other proteins in same PDB: d4e5ja2 automated match to d3ebja_ complexed with 581, mn, so4 |
Domain d4e5jd_: 4e5j D: [251688] Other proteins in same PDB: d4e5ja2 automated match to d3ebja_ complexed with 581, mn, so4 |
Domain d4e5la_: 4e5l A: [251689] automated match to d3ebja_ complexed with dbh, mn, so4 |
Domain d4e5lb_: 4e5l B: [251690] automated match to d3ebja_ complexed with dbh, mn, so4 |
Domain d4e5lc_: 4e5l C: [251691] automated match to d3ebja_ complexed with dbh, mn, so4 |
Domain d4e5ld_: 4e5l D: [251692] automated match to d3ebja_ complexed with dbh, mn, so4 |
Domain d4nfza_: 4nfz A: [253949] automated match to d3ebja_ complexed with mn |
Domain d4nfzb_: 4nfz B: [253950] automated match to d3ebja_ complexed with mn |
Domain d4nfzc_: 4nfz C: [253951] automated match to d3ebja_ complexed with mn |
Domain d5ccya1: 5ccy A:1-196 [316520] Other proteins in same PDB: d5ccya2 automated match to d4e5ed_ complexed with mn, tmp |
Domain d5cgva1: 5cgv A:1-196 [312813] Other proteins in same PDB: d5cgva2 automated match to d4e5ed_ complexed with 0n8, gol, mn |
Domain d5cl0a1: 5cl0 A:1-196 [316529] Other proteins in same PDB: d5cl0a2 automated match to d4e5ed_ complexed with mn, u5p |
Domain d5czna1: 5czn A:1-195 [316562] Other proteins in same PDB: d5czna2 automated match to d5dbsa_ complexed with mn, so4; mutant |
Domain d5d2oa1: 5d2o A:1-196 [316550] Other proteins in same PDB: d5d2oa2 automated match to d4e5ed_ complexed with mn; mutant |
Domain d5d42a1: 5d42 A:1-196 [316575] Other proteins in same PDB: d5d42a2 automated match to d4e5ed_ complexed with mn, tmp; mutant |
Domain d5d4ga_: 5d4g A: [313388] automated match to d4e5ed_ |
Domain d5d8ua1: 5d8u A:1-195 [316646] Other proteins in same PDB: d5d8ua2 automated match to d5dbsa_ complexed with 0n8, mn; mutant |
Domain d5d9ja1: 5d9j A:1-177 [316594] Other proteins in same PDB: d5d9ja2 automated match to d4e5ed_ complexed with 0n8, mn; mutant |
Domain d5dbsa_: 5dbs A: [313358] automated match to d4e5ed_ |
Domain d5deba1: 5deb A:1-176 [316569] Other proteins in same PDB: d5deba2 automated match to d5dbsa_ complexed with mn, u5p; mutant |
Domain d5desa1: 5des A:1-196 [316580] Other proteins in same PDB: d5desa2 automated match to d4e5ed_ complexed with mn |
Domain d5egaa_: 5ega A: [321906] automated match to d4e5ed_ complexed with gk0, mn |
Domain d5fdda1: 5fdd A:6-181 [280158] Other proteins in same PDB: d5fdda2 automated match to d4e5ed_ complexed with 4p8, mn, so4 |
Domain d5fdga1: 5fdg A:6-181 [280162] Other proteins in same PDB: d5fdga2 automated match to d4e5ed_ complexed with 0n8, mn, so4 |
Domain d5i13a1: 5i13 A:1-196 [315001] Other proteins in same PDB: d5i13a2 automated match to d4e5ed_ complexed with 4p9, mn, so4 |
Domain d5jhta1: 5jht A:1-196 [317305] Other proteins in same PDB: d5jhta2 automated match to d4e5ed_ complexed with mn, tla |
Domain d5jhva1: 5jhv A:1-196 [317271] Other proteins in same PDB: d5jhva2, d5jhvb2 automated match to d4e5ed_ complexed with mn |
Domain d5jhvb1: 5jhv B:1-196 [317282] Other proteins in same PDB: d5jhva2, d5jhvb2 automated match to d4e5ed_ complexed with mn |
Timeline for Protein PA N-terminal domain from c.52.1.34: PA N-terminal domain: