Class b: All beta proteins [48724] (177 folds) |
Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies) one turn of helix is made by two pairs of antiparallel strands linked with short turns has appearance of a sandwich of distinct architecture and jelly-roll topology |
Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families) Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold |
Family b.82.2.14: Histone demethylase core [254153] (4 proteins) Jumonji domain; Pfam PF02375 (JmjN) and Pfam PF02373 (JmjC); relationship to FIH1 (b.82.2.6) described in PubMed 16983801 |
Protein JMJD2D core [254343] (1 species) |
Human (Homo sapiens) [TaxId:9606] [254776] (8 PDB entries) |
Domain d3dxua_: 3dxu A: [245672] complexed with fe2, gol, oga, so4, zn |
Domain d4hooa_: 4hoo A: [252476] automated match to d3dxua_ complexed with act, ni, zn |
Domain d4hoob_: 4hoo B: [252477] automated match to d3dxua_ complexed with act, ni, zn |
Domain d5fp4a_: 5fp4 A: [314473] automated match to d3dxua_ complexed with fe2, gol, so4, yc8, zn |
Domain d5fp7a_: 5fp7 A: [324898] automated match to d3dxua_ complexed with fe2, gol, so4, yc8, zn |
Domain d5fp8a_: 5fp8 A: [314476] automated match to d3dxua_ complexed with auy, co, so4, zn |
Domain d5fp9a_: 5fp9 A: [314492] automated match to d3dxua_ complexed with 4sv, co, gol, so4, zn |
Domain d5fpaa_: 5fpa A: [314502] automated match to d3dxua_ complexed with co, n5j, so4, zn |
Domain d5fpba_: 5fpb A: [314499] automated match to d3dxua_ complexed with co, ha6, so4, zn |
Timeline for Protein JMJD2D core from b.82.2.14: Histone demethylase core: