Lineage for d4o5aa_ (4o5a A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2143708Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    parallel beta-sheet of 6 strands, order 213456
  4. 2143709Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families) (S)
    Similar in architecture to the superfamily II but partly differs in topology
  5. 2143989Family c.93.1.0: automated matches [191439] (1 protein)
    not a true family
  6. 2143990Protein automated matches [190646] (70 species)
    not a true protein
  7. 2144063Species Bifidobacterium animalis [TaxId:555970] [256375] (1 PDB entry)
  8. 2144064Domain d4o5aa_: 4o5a A: [254040]
    automated match to d3kkeb_
    complexed with gol, so4

Details for d4o5aa_

PDB Entry: 4o5a (more details), 1.78 Å

PDB Description: The crystal structure of a LacI family transcriptional regulator from Bifidobacterium animalis subsp. lactis DSM 10140
PDB Compounds: (A:) LacI family transcription regulator

SCOPe Domain Sequences for d4o5aa_:

Sequence, based on SEQRES records: (download)

>d4o5aa_ c.93.1.0 (A:) automated matches {Bifidobacterium animalis [TaxId: 555970]}
srtrriglvlgydpqllsaepyimrlisglgsaleerdysllvrmsmddddevsiledwi
atgnvdallllnleigdprielmknnpqmpclaladssltsglptlmsddaaasgtmirh
lalfghkniarvagpeelghsyirdaafseittelgmryrclhtdytpesgaeatkrlls
veprptaiiydndvmalagesvasvkgvrvpedlsiiswgdsfmnvaahppitalsrnil
esgrlaaqlmlklidgedvenveeppyelierastapaa

Sequence, based on observed residues (ATOM records): (download)

>d4o5aa_ c.93.1.0 (A:) automated matches {Bifidobacterium animalis [TaxId: 555970]}
srtrriglvlgydyimrlisglgsaleerdysllvrmsmddddevsiledwiatgnvdal
lllnleigdprielmknnpqmpclaladssltsglptlmsddaaasgtmirhlalfghkn
iarvagpeelghsyirdaafseittelgmryrclhtdytpesgaeatkrllsveprptai
iydndvmalagesvasvkgvrvpedlsiiswgdsfmnvaahppitalsrnilesgrlaaq
lmlklidgedvenveeppyelierastapaa

SCOPe Domain Coordinates for d4o5aa_:

Click to download the PDB-style file with coordinates for d4o5aa_.
(The format of our PDB-style files is described here.)

Timeline for d4o5aa_: