SCOPe 2.08: Domain d4o5aa_: 4o5a A:

Lineage for d4o5aa_ (4o5a A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   parallel beta-sheet of 6 strands, order 213456

4. Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families)
   Similar in architecture to the superfamily II but partly differs in topology

5. Family c.93.1.0: automated matches [191439] (1 protein)
   not a true family

6. Protein automated matches [190646] (77 species)
   not a true protein

7. Species Bifidobacterium animalis [TaxId:555970] [256375] (1 PDB entry)

8. Domain d4o5aa_: 4o5a A: [254040]
   automated match to d3kkeb_
   complexed with gol, so4

Details for d4o5aa_

PDB Entry: 4o5a, 1.78 Å

PDB Description: The crystal structure of a LacI family transcriptional regulator from Bifidobacterium animalis subsp. lactis DSM 10140

PDB Compounds: (A:) LacI family transcription regulator

SCOPe Domain Sequences for d4o5aa_:

Sequence, based on SEQRES records:

>d4o5aa_ c.93.1.0 (A:) automated matches {Bifidobacterium animalis [TaxId: 555970]}
srtrriglvlgydpqllsaepyimrlisglgsaleerdysllvrmsmddddevsiledwi
atgnvdallllnleigdprielmknnpqmpclaladssltsglptlmsddaaasgtmirh
lalfghkniarvagpeelghsyirdaafseittelgmryrclhtdytpesgaeatkrlls
veprptaiiydndvmalagesvasvkgvrvpedlsiiswgdsfmnvaahppitalsrnil
esgrlaaqlmlklidgedvenveeppyelierastapaa

Sequence, based on observed residues (ATOM records):

>d4o5aa_ c.93.1.0 (A:) automated matches {Bifidobacterium animalis [TaxId: 555970]}
srtrriglvlgydyimrlisglgsaleerdysllvrmsmddddevsiledwiatgnvdal
lllnleigdprielmknnpqmpclaladssltsglptlmsddaaasgtmirhlalfghkn
iarvagpeelghsyirdaafseittelgmryrclhtdytpesgaeatkrllsveprptai
iydndvmalagesvasvkgvrvpedlsiiswgdsfmnvaahppitalsrnilesgrlaaq
lmlklidgedvenveeppyelierastapaa

Timeline for d4o5aa_:

• d4o5aa_ first appeared in SCOPe 2.04
  
• d4o5aa_ appears in SCOPe 2.07