SCOPe 2.07: Domain d4n5yo1: 4n5y O:11-324

Lineage for d4n5yo1 (4n5y O:11-324)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)

6. Protein Hemagglutinin [49824] (19 species)
   includes rudiment esterase domain

7. Species Influenza A virus, different strains [TaxId:11320] [49825] (127 PDB entries)

8. Domain d4n5yo1: 4n5y O:11-324 [253895]
   Other proteins in same PDB: d4n5ya2, d4n5yb1, d4n5yb2, d4n5yc2, d4n5yd1, d4n5yd2, d4n5ye2, d4n5yf1, d4n5yf2, d4n5yg2, d4n5yh1, d4n5yh2, d4n5yi2, d4n5yj1, d4n5yj2, d4n5yk2, d4n5yl1, d4n5yl2, d4n5ym2, d4n5yn1, d4n5yn2, d4n5yo2, d4n5yp1, d4n5yp2, d4n5yq2, d4n5yr1, d4n5yr2, d4n5ys2, d4n5yt1, d4n5yt2, d4n5yu2, d4n5yv1, d4n5yv2, d4n5yw2, d4n5yx1, d4n5yx2, d4n5yy2, d4n5yz1, d4n5yz2
   automated match to d3gbna_
   complexed with nag; mutant

Details for d4n5yo1

PDB Entry: 4n5y, 3.16 Å

PDB Description: crystal structure of h5 hemagglutinin mutant (n158d, n224k and q226l) from the influenza virus a/viet nam/1203/2004 (h5n1)

PDB Compounds: (O:) Hemagglutinin HA1 chain

SCOPe Domain Sequences for d4n5yo1:

Sequence; same for both SEQRES and ATOM records:

>d4n5yo1 b.19.1.2 (O:11-324) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
dqicigyhannsteqvdtimeknvtvthaqdilekkhngklcdldgvkplilrdcsvagw
llgnpmcdefinvpewsyivekanpvndlcypgdfndyeelkhllsrinhfekiqiipks
swssheaslgvssacpyqgkssffrnvvwlikkdstyptikrsynntnqedllvlwgihh
pndaaeqtklyqnpttyisvgtstlnqrlvpriatrskvkglsgrmeffwtilkpndain
fesngnfiapeyaykivkkgdstimkseleygncntkcqtpmgainssmpfhnihpltig
ecpkyvksnrlvlatglrnsp

Timeline for d4n5yo1:

• d4n5yo1 first appeared in SCOPe 2.04, called d4n5yo_
  
• d4n5yo1 appears in SCOPe 2.06
  
• d4n5yo1 appears in the current release, SCOPe 2.08