SCOPe 2.04: Domain d4ktya2: 4kty A:191-501

Lineage for d4ktya2 (4kty A:191-501)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (23 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.4: Transglutaminase core [54044] (3 proteins)

6. Protein automated matches [190634] (3 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [256347] (1 PDB entry)

8. Domain d4ktya2: 4kty A:191-501 [253438]
   Other proteins in same PDB: d4ktya1, d4ktya3, d4ktya4, d4ktyb1, d4ktyb3, d4ktyb4
   automated match to d1evua4
   complexed with ca, gol, so4

Details for d4ktya2

PDB Entry: 4kty, 1.98 Å

PDB Description: Fibrin-stabilizing factor with a bound ligand

PDB Compounds: (A:) coagulation factor xiii a chain

SCOPe Domain Sequences for d4ktya2:

Sequence, based on SEQRES records:

>d4ktya2 d.3.1.4 (A:191-501) automated matches {Human (Homo sapiens) [TaxId: 9606]}
davyldnekereeyvlndigvifygevndiktrswsygqfedgildtclyvmdraqmdls
grgnpikvsrvgsamvnakddegvlvgswdniyaygvppsawtgsvdilleyrssenpvr
ygqcwvfagvfntflrclgiparivtnyfsahdndanlqmdifleedgnvnskltkdsvw
nyhcwneawmtrpdlpvgfggwqavdstpqensdgmyrcgpasvqaikhghvcfqfdapf
vfaevnsdliyitakkdgthvvenvdathigklivtkqiggdgmmditdtykfqegqeee
rlaletalmyg

Sequence, based on observed residues (ATOM records):

>d4ktya2 d.3.1.4 (A:191-501) automated matches {Human (Homo sapiens) [TaxId: 9606]}
davyldnekereeyvlndigvifygevndiktrswsygqfedgildtclyvmdraqmdls
grgnpikvsrvgsamvnakddegvlvgswdniyaygvppsawtgsvdilleyrssenpvr
ygqcwvfagvfntflrclgiparivtnyfsahdndanlqmdifleedgnvnskltkdsvw
nyhcwneawmtrpdlpvgfggwqavdstpqensdgmyrcgpasvqaikhghvcfqfdapf
vfaevnsdliyitakkthvvenvdathigklivtkqiggdgmmditdtykfqegqeeerl
aletalmyg

Timeline for d4ktya2:

• d4ktya2 is new in SCOPe 2.04-stable
  
• d4ktya2 appears in SCOPe 2.05
  
• d4ktya2 appears in the current release, SCOPe 2.08