SCOPe 2.05: Domain d4jo4m1: 4jo4 M:1-107

Lineage for d4jo4m1 (4jo4 M:1-107)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.0: automated matches [191470] (1 protein)
   not a true family

6. Protein automated matches [190740] (26 species)
   not a true protein

7. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [225523] (15 PDB entries)

8. Domain d4jo4m1: 4jo4 M:1-107 [252994]
   automated match to d4jo3l1
   complexed with 1pe, so4

Details for d4jo4m1

PDB Entry: 4jo4, 2.27 Å

PDB Description: crystal structure of rabbit mab r20 fab

PDB Compounds: (M:) monoclonal anti-HIV-1 gp120 V3 antibody R20 light chain

SCOPe Domain Sequences for d4jo4m1:

Sequence; same for both SEQRES and ATOM records:

>d4jo4m1 b.1.1.0 (M:1-107) automated matches {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
divmtqtpasvsaavggtvtincqasetisnylawyqqkpgqppklliykastlasgvss
rfkgsgsgteytltisgvqcddaatyycqqgysisdidnsfgggtevvvk

Timeline for d4jo4m1:

• d4jo4m1 first appeared in SCOPe 2.04
  
• d4jo4m1 appears in SCOPe 2.06
  
• d4jo4m1 appears in the current release, SCOPe 2.08