Lineage for d4jm2b1 (4jm2 B:1-106)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2352459Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2352460Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2365354Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2365355Protein automated matches [190740] (29 species)
    not a true protein
  7. 2365565Species Human (Homo sapiens) [TaxId:9606] [187920] (1626 PDB entries)
  8. 2368422Domain d4jm2b1: 4jm2 B:1-106 [252980]
    Other proteins in same PDB: d4jm2b2, d4jm2c1, d4jm2c2, d4jm2e_, d4jm2f1, d4jm2f2
    automated match to d1dn0a1
    complexed with nag, pg4

Details for d4jm2b1

PDB Entry: 4jm2 (more details), 3.1 Å

PDB Description: crystal structure of pgt 135 fab in complex with gp120 core protein from hiv-1 strain jr-fl bound to cd4 and 17b fab
PDB Compounds: (B:) PGT 135 Light Chain

SCOPe Domain Sequences for d4jm2b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4jm2b1 b.1.1.0 (B:1-106) automated matches {Human (Homo sapiens) [TaxId: 9606]}
eivmtqspdtlsvspgetvtlscrasqninknlawyqykpgqsprlvifetyskiaafpa
rfvasgsgteftltinnmqsedvavyycqqyeewprtfgqgtkvdi

SCOPe Domain Coordinates for d4jm2b1:

Click to download the PDB-style file with coordinates for d4jm2b1.
(The format of our PDB-style files is described here.)

Timeline for d4jm2b1: