SCOPe 2.07: Domain d4jgza_: 4jgz A:

Lineage for d4jgza_ (4jgz A:)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.0: automated matches [191569] (1 protein)
   not a true family

6. Protein automated matches [190988] (22 species)
   not a true protein

7. Species Human coxsackievirus a16 [TaxId:31704] [256333] (2 PDB entries)

8. Domain d4jgza_: 4jgz A: [252941]
   automated match to d1cov1_

Details for d4jgza_

PDB Entry: 4jgz, 3 Å

PDB Description: Crystal structure of human coxsackievirus A16 uncoating intermediate (space group I222)

PDB Compounds: (A:) Polyprotein, capsid protein VP1

SCOPe Domain Sequences for d4jgza_:

Sequence, based on SEQRES records:

>d4jgza_ b.121.4.0 (A:) automated matches {Human coxsackievirus a16 [TaxId: 31704]}
nlietrcvlnhhstqetaignffsraglvsiitmpttgtqntdgyvnwdidlmgyaqlrr
kcelftymrfdaeftfvvakpngelvpqllqymyvppgapkptsrdsfawqtatnpsvfv
kmtdppaqvsvpfmspasayqwfydgyptfgehlqandldygqcpnnmmgtfsirtvgie
ksphsitlrvymrikhvrawiprplrnqpylfktnpnykgndikctstsrdkittl

Sequence, based on observed residues (ATOM records):

>d4jgza_ b.121.4.0 (A:) automated matches {Human coxsackievirus a16 [TaxId: 31704]}
nlietrcvlnhhstqetaignffsraglvsiitmpttgtqntdgyvnwdidlmgyaqlrr
kcelftymrfdaeftfvvakpngelvpqllqymyvppgapkptsrdsfawqtatnpsvfv
kmtdppaqvsvpfmspasayqwfydgyptdldygqcpnnmmgtfsirtvgieksphsitl
rvymrikhvrawiprplrnqpylfktnpnykgndikctstsrdkittl

Timeline for d4jgza_:

• d4jgza_ first appeared in SCOPe 2.04
  
• d4jgza_ appears in SCOPe 2.06
  
• d4jgza_ appears in the current release, SCOPe 2.08