SCOPe 2.05: Domain d4janl2: 4jan L:106-207

Lineage for d4janl2 (4jan L:106-207)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein automated matches [190374] (14 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187221] (409 PDB entries)

8. Domain d4janl2: 4jan L:106-207 [252850]
   Other proteins in same PDB: d4janb1, d4janl1
   automated match to d1lila2
   complexed with gol, na, nag

Details for d4janl2

PDB Entry: 4jan, 3.15 Å

PDB Description: crystal structure of broadly neutralizing antibody ch103 in complex with hiv-1 gp120

PDB Compounds: (L:) ANTIGEN BINDING FRAGMENT OF LIGHT CHAIN of CH103

SCOPe Domain Sequences for d4janl2:

Sequence; same for both SEQRES and ATOM records:

>d4janl2 b.1.1.2 (L:106-207) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vlrqpkanptvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttp
skqsnnkyaassylsltpeqwkshrsyscqvthegstvektva

Timeline for d4janl2:

• d4janl2 first appeared in SCOPe 2.04
  
• d4janl2 appears in SCOPe 2.06
  
• d4janl2 appears in the current release, SCOPe 2.08