SCOPe 2.04: Domain d4j0fb1: 4j0f B:8-198

Lineage for d4j0fb1 (4j0f B:8-198)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (181 species)
   not a true protein

7. Species Nematode (Caenorhabditis elegans) [TaxId:6239] [237812] (2 PDB entries)

8. Domain d4j0fb1: 4j0f B:8-198 [252779]
   Other proteins in same PDB: d4j0fa2, d4j0fb2
   automated match to d4j0eb1

Details for d4j0fb1

PDB Entry: 4j0f, 2.2 Å

PDB Description: Crystal structure of 3-hydroxyacyl-CoA dehydrogenase from Caenorhadbitis elegans in P212121 space group

PDB Compounds: (B:) Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1

SCOPe Domain Sequences for d4j0fb1:

Sequence, based on SEQRES records:

>d4j0fb1 c.2.1.0 (B:8-198) automated matches {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
mqnirnvaivgsgqmgsgiaqvtassgfnvmladvnkkaldramkaisqsvthlskkqkg
tdkeksdfvtltmsriktcnnvstavadadliieaaienidlkrgifaqieqsckkdsil
ttntssflledvakglqdktrfgglhffnpvpvmkllevirsddtsdetyatlikfgtav
gkttvackdsp

Sequence, based on observed residues (ATOM records):

>d4j0fb1 c.2.1.0 (B:8-198) automated matches {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
mqnirnvaivgsgqmgsgiaqvtassgfnvmladvnkkaldramkaisqsvthlsktdke
ksdfvtltmsriktcnnvstavadadliieaaienidlkrgifaqieqsckkdsilttnt
ssflledvakglqdktrfgglhffnpvpvmkllevirsddtsdetyatlikfgtavgktt
vackdsp

Timeline for d4j0fb1:

• d4j0fb1 is new in SCOPe 2.04-stable
  
• d4j0fb1 appears in SCOPe 2.05
  
• d4j0fb1 appears in the current release, SCOPe 2.08