SCOPe 2.08: Domain d4iymc1: 4iym C:-1-486

Lineage for d4iymc1 (4iym C:-1-486)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.82: ALDH-like [53719] (1 superfamily)
   consists of two similar domains with 3 layers (a/b/a) each; duplication
   core: parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.82.1: ALDH-like [53720] (3 families)
   binds NAD differently from other NAD(P)-dependent oxidoreductases

5. Family c.82.1.0: automated matches [191448] (1 protein)
   not a true family

6. Protein automated matches [190683] (61 species)
   not a true protein

7. Species Sinorhizobium meliloti [TaxId:266834] [226320] (9 PDB entries)

8. Domain d4iymc1: 4iym C:-1-486 [252750]
   Other proteins in same PDB: d4iymc2, d4iyme2, d4iymo2
   automated match to d3k2wb_
   complexed with mg, nad

Details for d4iymc1

PDB Entry: 4iym, 2.2 Å

PDB Description: Crystal structure of putative methylmalonate-semialdehyde dehydrogenase from Sinorhizobium meliloti 1021 complexed with NAD, target 011934

PDB Compounds: (C:) Methylmalonate-semialdehyde dehydrogenase

SCOPe Domain Sequences for d4iymc1:

Sequence; same for both SEQRES and ATOM records:

>d4iymc1 c.82.1.0 (C:-1-486) automated matches {Sinorhizobium meliloti [TaxId: 266834]}
myelghfidgkrvagtsgrvsnifnpatgevqgtvalasdadlaaavesakaaqpkwaat
npqrrarvfmkfvqllndnmnelaemlsrehgktiddakgdivrglevcefvigiphlqk
seftegagpgidmysirqpvgigagitpfnfpgmipmwmfapaiacgnafilkpserdps
vpirlaelmieaglpagilnvvngdkgavdailthpdiaavsfvgstpiaryvygtaamn
gkraqcfggaknhmiimpdadldqaanaligagygsagercmaisvavpvgeetanrlid
klvpmveslrigpytdekadmgpvvtkeaeqrirslidsgieqgaklvvdgrdfklqgye
nghfiggclfddvtpdmdiykteifgpvlsvvrarnyeealslpmkheygngvaiytrdg
daardfasrinigmvgvnvpipvplayhsfggwksssfgdlnqhgtdsikfwtrtktits
rwpsgikd

Timeline for d4iymc1:

• d4iymc1 first appeared in SCOPe 2.04, called d4iymc_
  
• d4iymc1 appears in SCOPe 2.07