Lineage for d4irjc2 (4irj C:116-204)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2024392Protein automated matches [190374] (14 species)
    not a true protein
  7. 2024406Species Human (Homo sapiens) [TaxId:9606] [187221] (683 PDB entries)
  8. 2025169Domain d4irjc2: 4irj C:116-204 [252688]
    Other proteins in same PDB: d4irja1, d4irja2, d4irjb_, d4irjc1, d4irjd1, d4irjd2
    automated match to d2pyfa2
    complexed with 1l9, nag

Details for d4irjc2

PDB Entry: 4irj (more details), 3 Å

PDB Description: Structure of the mouse CD1d-4ClPhC-alpha-GalCer-iNKT TCR complex
PDB Compounds: (C:) Valpha14 (mouse variable domain, human constant domain)

SCOPe Domain Sequences for d4irjc2:

Sequence, based on SEQRES records: (download)

>d4irjc2 b.1.1.2 (C:116-204) automated matches {Human (Homo sapiens) [TaxId: 9606]}
iqnpdpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksns
avawsnksdfacanafnnsiipedtffps

Sequence, based on observed residues (ATOM records): (download)

>d4irjc2 b.1.1.2 (C:116-204) automated matches {Human (Homo sapiens) [TaxId: 9606]}
iqnpdpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksns
avawsnkdfacanafnnsiipedtffps

SCOPe Domain Coordinates for d4irjc2:

Click to download the PDB-style file with coordinates for d4irjc2.
(The format of our PDB-style files is described here.)

Timeline for d4irjc2: