Lineage for d4gqhy1 (4gqh Y:1-154)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1987359Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 1987688Superfamily a.24.5: TMV-like viral coat proteins [47195] (1 family) (S)
    automatically mapped to Pfam PF00721
  5. 1987689Family a.24.5.1: TMV-like viral coat proteins [47196] (4 protein domains)
  6. 1987696Protein Tobacco mosaic virus coat protein [47197] (1 species)
  7. 1987697Species Tobacco mosaic virus, vulgare strain [TaxId:12242] [47198] (5 PDB entries)
  8. 1987725Domain d4gqhy1: 4gqh Y:1-154 [252319]
    Other proteins in same PDB: d4gqha2, d4gqhb2, d4gqhc2, d4gqhd2, d4gqhe2, d4gqhf2, d4gqhg2, d4gqhh2, d4gqhi2, d4gqhj2, d4gqhk2, d4gqhl2, d4gqhm2, d4gqhn2, d4gqho2, d4gqhp2, d4gqhq2, d4gqhr2, d4gqhs2, d4gqht2, d4gqhu2, d4gqhv2, d4gqhw2, d4gqhx2, d4gqhy2, d4gqhz2
    automated match to d2tmvp_

Details for d4gqhy1

PDB Entry: 4gqh (more details), 3.06 Å

PDB Description: The Conformations and Interactions of the Four-Layer Aggregate Revealed by X-ray Crystallography Diffraction Implied the Importance of Peptides at Opposite Ends in Their Assemblies
PDB Compounds: (Y:) capsid protein

SCOPe Domain Sequences for d4gqhy1:

Sequence, based on SEQRES records: (download)

>d4gqhy1 a.24.5.1 (Y:1-154) Tobacco mosaic virus coat protein {Tobacco mosaic virus, vulgare strain [TaxId: 12242]}
sysittpsqfvflssawadpielinlctnalgnqfqtqqartvvqrqfsevwkpspqvtv
rfpdsdfkvyrynavldplvtallgafdtrnriievenqanpttaetldatrrvddatva
irsainnlivelirgtgsynrssfesssglvwts

Sequence, based on observed residues (ATOM records): (download)

>d4gqhy1 a.24.5.1 (Y:1-154) Tobacco mosaic virus coat protein {Tobacco mosaic virus, vulgare strain [TaxId: 12242]}
sysittpsqfvflssawadpielinlctnalgnqfqtqqartvvqrqfsevwkpspqvtv
rfpdsdfkvyrynavldplvtallgafdtvddatvairsainnlivelirgtgsynrssf
esssglvwts

SCOPe Domain Coordinates for d4gqhy1:

Click to download the PDB-style file with coordinates for d4gqhy1.
(The format of our PDB-style files is described here.)

Timeline for d4gqhy1:

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Domains from same chain:
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d4gqhy2
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Domains from other chains:
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d4gqha1, d4gqha2, d4gqhb1, d4gqhb2, d4gqhc1, d4gqhc2, d4gqhd1, d4gqhd2, d4gqhe1, d4gqhe2, d4gqhf1, d4gqhf2, d4gqhg1, d4gqhg2, d4gqhh1, d4gqhh2, d4gqhi1, d4gqhi2, d4gqhj1, d4gqhj2, d4gqhk1, d4gqhk2, d4gqhl1, d4gqhl2, d4gqhm1, d4gqhm2, d4gqhn1, d4gqhn2, d4gqho1, d4gqho2, d4gqhp1, d4gqhp2, d4gqhq1, d4gqhq2, d4gqhr1, d4gqhr2, d4gqhs1, d4gqhs2, d4gqht1, d4gqht2, d4gqhu1, d4gqhu2, d4gqhv1, d4gqhv2, d4gqhw1, d4gqhw2, d4gqhx1, d4gqhx2, d4gqhz1, d4gqhz2