SCOPe 2.04: Domain d4gqhb_: 4gqh B:

Lineage for d4gqhb_ (4gqh B:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
   core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down

4. Superfamily a.24.5: TMV-like viral coat proteins [47195] (1 family)
   automatically mapped to Pfam PF00721

5. Family a.24.5.1: TMV-like viral coat proteins [47196] (4 proteins)

6. Protein Tobacco mosaic virus coat protein [47197] (1 species)

7. Species Tobacco mosaic virus, vulgare strain [TaxId:12242] [47198] (5 PDB entries)

8. Domain d4gqhb_: 4gqh B: [252296]
   automated match to d2tmvp_

Details for d4gqhb_

PDB Entry: 4gqh, 3.06 Å

PDB Description: The Conformations and Interactions of the Four-Layer Aggregate Revealed by X-ray Crystallography Diffraction Implied the Importance of Peptides at Opposite Ends in Their Assemblies

PDB Compounds: (B:) capsid protein

SCOPe Domain Sequences for d4gqhb_:

Sequence, based on SEQRES records:

>d4gqhb_ a.24.5.1 (B:) Tobacco mosaic virus coat protein {Tobacco mosaic virus, vulgare strain [TaxId: 12242]}
shsysittpsqfvflssawadpielinlctnalgnqfqtqqartvvqrqfsevwkpspqv
tvrfpdsdfkvyrynavldplvtallgafdtrnriievenqanpttaetldatrrvddat
vairsainnlivelirgtgsynrssfesssglvwts

Sequence, based on observed residues (ATOM records):

>d4gqhb_ a.24.5.1 (B:) Tobacco mosaic virus coat protein {Tobacco mosaic virus, vulgare strain [TaxId: 12242]}
shsysittpsqfvflssawadpielinlctnalgnqfqtqqartvvqrqfsevwkpspqv
tvrfpdsdfkvyrynavldplvtallgafdtrndatrrvddatvairsainnlivelirg
tgsynrssfesssglvwts

Timeline for d4gqhb_:

• d4gqhb_ is new in SCOPe 2.04-stable
  
• d4gqhb_ appears in SCOPe 2.05
  
• d4gqhb_ appears in the current release, SCOPe 2.08, called d4gqhb1