SCOPe 2.04: Domain d4g1ma4: 4g1m A:738-959

Lineage for d4g1ma4 (4g1m A:738-959)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.15: Integrin domains [69179] (2 families)

5. Family b.1.15.0: automated matches [233856] (1 protein)
   not a true family

6. Protein automated matches [233857] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [233858] (5 PDB entries)

8. Domain d4g1ma4: 4g1m A:738-959 [252126]
   Other proteins in same PDB: d4g1ma1
   automated match to d1m1xa3
   complexed with ca, na, nag

Details for d4g1ma4

PDB Entry: 4g1m, 2.9 Å

PDB Description: re-refinement of alpha v beta 3 structure

PDB Compounds: (A:) Integrin alpha-V

SCOPe Domain Sequences for d4g1ma4:

Sequence, based on SEQRES records:

>d4g1ma4 b.1.15.0 (A:738-959) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vlaaveirgvsspdhvflpipnwehkenpeteedvgpvvqhiyelrnngpssfskamlhl
qwpykynnntllyilhydidgpmnctsdmeinplrikisslqttekndtvagqgerdhli
tkrdlalsegdihtlgcgvaqclkivcqvgrldrgksailyvksllwtetfmnkenqnhs
yslkssasfnviefpyknlpieditnstlvttnvtwgiqpap

Sequence, based on observed residues (ATOM records):

>d4g1ma4 b.1.15.0 (A:738-959) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vlaaveirgvsspdhvflpipnwehkenpeteedvgpvvqhiyelrnngpssfskamlhl
qwpykynnntllyilhydidgpmnctsdmeinplrikissdihtlgcgvaqclkivcqvg
rldrgksailyvksllwtetfmnkenqnhsyslkssasfnviefpyknlpieditnstlv
ttnvtwgiqpap

Timeline for d4g1ma4:

• d4g1ma4 is new in SCOPe 2.04-stable
  
• d4g1ma4 appears in SCOPe 2.05
  
• d4g1ma4 appears in the current release, SCOPe 2.08