Lineage for d4edhb1 (4edh B:1-210)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2113903Family c.37.1.0: automated matches [191323] (1 protein)
    not a true family
  6. 2113904Protein automated matches [190123] (130 species)
    not a true protein
  7. 2114605Species Pseudomonas aeruginosa, PA01 [TaxId:208964] [226294] (11 PDB entries)
  8. 2114607Domain d4edhb1: 4edh B:1-210 [251730]
    Other proteins in same PDB: d4edhb2
    automated match to d3uwob_
    complexed with adp, edo, mg, so4, tmp, trs

Details for d4edhb1

PDB Entry: 4edh (more details), 1.32 Å

PDB Description: The crystal structure of thymidylate kinase from Pseudomonas aeruginosa PAO1 in complex with ADP,TMP and Mg.
PDB Compounds: (B:) thymidylate kinase

SCOPe Domain Sequences for d4edhb1:

Sequence, based on SEQRES records: (download)

>d4edhb1 c.37.1.0 (B:1-210) automated matches {Pseudomonas aeruginosa, PA01 [TaxId: 208964]}
mtglfvtlegpegagkstnrdylaerlrergievqltrepggtplaerirelllapsdep
maadtelllmfaaraqhlagvirpalargavvlcdrftdatyayqgggrglpeariaale
sfvqgdlrpdltlvfdlpveiglaraaargrldrfeqedrrffeavrqtylqraaqaper
yqvldaglplaevqagldrllpnllerlng

Sequence, based on observed residues (ATOM records): (download)

>d4edhb1 c.37.1.0 (B:1-210) automated matches {Pseudomonas aeruginosa, PA01 [TaxId: 208964]}
mtglfvtlegpegagkstnrdylaerlrergievqltrepggtplaerirelllapsdep
maadtelllmfaaraqhlagvirpalargavvlcdrftdatyayqgggrglpeariaale
sfvqgdlrpdltlvfdlpveiglararldrfeqedrrffeavrqtylqraaqaperyqvl
daglplaevqagldrllpnllerlng

SCOPe Domain Coordinates for d4edhb1:

Click to download the PDB-style file with coordinates for d4edhb1.
(The format of our PDB-style files is described here.)

Timeline for d4edhb1:

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Domains from same chain:
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d4edhb2
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Domains from other chains:
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d4edha_