SCOPe 2.08: Domain d4dbmd1: 4dbm D:1-207

Lineage for d4dbmd1 (4dbm D:1-207)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.96: Nicotinic receptor ligand binding domain-like [63711] (1 superfamily)
   sandwich; 8 strands in 2 sheets; greek-key: partial topological similarity to immunoglobulin-like folds

4. Superfamily b.96.1: Nicotinic receptor ligand binding domain-like [63712] (2 families)

5. Family b.96.1.0: automated matches [193505] (1 protein)
   not a true family

6. Protein automated matches [193506] (5 species)
   not a true protein

7. Species California sea hare (Aplysia californica) [TaxId:6500] [230583] (67 PDB entries)

8. Domain d4dbmd1: 4dbm D:1-207 [251394]
   Other proteins in same PDB: d4dbma2, d4dbmb2, d4dbmc2, d4dbmd2, d4dbme2
   automated match to d2c9ta_
   complexed with 0j0, nag

Details for d4dbmd1

PDB Entry: 4dbm, 2.3 Å

PDB Description: aplysia californica-achbp in complex with triazole 18

PDB Compounds: (D:) Soluble acetylcholine receptor

SCOPe Domain Sequences for d4dbmd1:

Sequence, based on SEQRES records:

>d4dbmd1 b.96.1.0 (D:1-207) automated matches {California sea hare (Aplysia californica) [TaxId: 6500]}
hsqanlmrlksdlfnrspmypgptkddpltvtlgftlqdivkadsstnevdlvyyeqqrw
klnslmwdpneygnitdfrtsaadiwtpditaysstrpvqvlspqiavvthdgsvmfipa
qrlsfmcdptgvdseegatcavkfgswvysgfeidlktdtdqvdlssyyasskyeilsat
qtrqvqhysccpepyidvnlvvkfrer

Sequence, based on observed residues (ATOM records):

>d4dbmd1 b.96.1.0 (D:1-207) automated matches {California sea hare (Aplysia californica) [TaxId: 6500]}
hsqanlmrlksdlfnmypgptkddpltvtlgftlqdivkadsstnevdlvyyeqqrwkln
slmwdpneygnitdfrtsaadiwtpditaysstrpvqvlspqiavvthdgsvmfipaqrl
sfmcdptgvdseegatcavkfgswvysgfeidlktdtdqvdlssyyasskyeilsatqtr
qvqhysccpepyidvnlvvkfrer

Timeline for d4dbmd1:

• d4dbmd1 first appeared in SCOPe 2.04, called d4dbmd_
  
• d4dbmd1 appears in SCOPe 2.07