Lineage for d3vd3d3 (3vd3 D:334-625)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1815292Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1818156Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 1818795Family c.1.8.3: beta-glycanases [51487] (27 proteins)
    consist of a number of sequence families
  6. 1818879Protein beta-Galactosidase, domain 3 [51510] (2 species)
  7. 1818887Species Escherichia coli [TaxId:562] [51511] (42 PDB entries)
    Uniprot P00722
  8. 1819015Domain d3vd3d3: 3vd3 D:334-625 [250375]
    Other proteins in same PDB: d3vd3a1, d3vd3a2, d3vd3a4, d3vd3a5, d3vd3b1, d3vd3b2, d3vd3b4, d3vd3b5, d3vd3c1, d3vd3c2, d3vd3c4, d3vd3c5, d3vd3d1, d3vd3d2, d3vd3d4, d3vd3d5
    automated match to d1jz7a5
    complexed with dms, mg, na

Details for d3vd3d3

PDB Entry: 3vd3 (more details), 2.8 Å

PDB Description: e. coli (lacz) beta-galactosidase (n460d)
PDB Compounds: (D:) beta-galactosidase

SCOPe Domain Sequences for d3vd3d3:

Sequence; same for both SEQRES and ATOM records: (download)

>d3vd3d3 c.1.8.3 (D:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}
evriengllllngkpllirgvnrhehhplhgqvmdeqtmvqdillmkqnnfnavrcshyp
nhplwytlcdryglyvvdeaniethgmvpmnrltddprwlpamservtrmvqrdrnhpsv
iiwslgdesghganhdalyrwiksvdpsrpvqyegggadttatdiicpmyarvdedqpfp
avpkwsikkwlslpgetrplilceyahamgnslggfakywqafrqyprlqggfvwdwvdq
slikydengnpwsayggdfgdtpndrqfcmnglvfadrtphpalteakhqqq

SCOPe Domain Coordinates for d3vd3d3:

Click to download the PDB-style file with coordinates for d3vd3d3.
(The format of our PDB-style files is described here.)

Timeline for d3vd3d3: