SCOPe 2.08: Domain d3u88d_: 3u88 D:

Lineage for d3u88d_ (3u88 D:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.48: N-cbl like [47667] (5 superfamilies)
   4 helices; bundle, left-handed twist; left-handed superhelix

4. Superfamily a.48.4: HIV integrase-binding domain [140576] (2 families)

5. Family a.48.4.1: HIV integrase-binding domain [140577] (2 proteins)
   N-terminal part of PfamB PB012949

6. Protein automated matches [191076] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188992] (6 PDB entries)

8. Domain d3u88d_: 3u88 D: [250150]
   Other proteins in same PDB: d3u88a1, d3u88a2, d3u88b1, d3u88b2
   automated match to d3hphe_
   complexed with 0br, chd, ggb, glv, so4

Details for d3u88d_

PDB Entry: 3u88, 3 Å

PDB Description: crystal structure of human menin in complex with mll1 and ledgf

PDB Compounds: (D:) Lens epithelium-derived growth factor

SCOPe Domain Sequences for d3u88d_:

Sequence, based on SEQRES records:

>d3u88d_ a.48.4.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qrihaeiknslkidnldvnrciealdelaslqvtmqqaqkhtemittlkkirrfkvsqvi
mekstmlynkfknmflvg

Sequence, based on observed residues (ATOM records):

>d3u88d_ a.48.4.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qrihaeiknslvnrciealdelaslqvtmqqaqkhtemittlkkirqvimekstmlynkf
knmflvg

Timeline for d3u88d_:

• d3u88d_ first appeared in SCOPe 2.04
  
• d3u88d_ appears in SCOPe 2.07