Lineage for d3s1me1 (3s1m E:2-143)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2121131Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. 2121717Superfamily c.52.3: Eukaryotic RPB5 N-terminal domain [53036] (1 family) (S)
  5. 2121718Family c.52.3.1: Eukaryotic RPB5 N-terminal domain [53037] (2 protein domains)
  6. 2121751Protein automated matches [254701] (3 species)
    not a true protein
  7. 2121752Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255951] (3 PDB entries)
  8. 2121754Domain d3s1me1: 3s1m E:2-143 [249265]
    Other proteins in same PDB: d3s1ma_, d3s1mb_, d3s1me2, d3s1mf_, d3s1mh_, d3s1mi1, d3s1mi2, d3s1mj_, d3s1mk_, d3s1ml_
    automated match to d1dzfa1
    protein/DNA complex; protein/RNA complex; complexed with mg, zn

Details for d3s1me1

PDB Entry: 3s1m (more details), 3.13 Å

PDB Description: RNA Polymerase II Initiation Complex with a 5-nt RNA (variant 1)
PDB Compounds: (E:) DNA-directed RNA polymerases I, II, and III subunit RPABC1

SCOPe Domain Sequences for d3s1me1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3s1me1 c.52.3.1 (E:2-143) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d3s1me1:

Click to download the PDB-style file with coordinates for d3s1me1.
(The format of our PDB-style files is described here.)

Timeline for d3s1me1: