SCOPe 2.08: Domain d3rmxd2: 3rmx D:1068-1276

Lineage for d3rmxd2 (3rmx D:1068-1276)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.42: beta-Trefoil [50352] (8 superfamilies)
   barrel, closed; n=6, S=12; and a hairpin triplet; meander
   duplication: has internal pseudo threefold symmetry

4. Superfamily b.42.4: STI-like [50386] (3 families)

5. Family b.42.4.0: automated matches [191368] (1 protein)
   not a true family

6. Protein automated matches [190445] (12 species)
   not a true protein

7. Species Clostridium botulinum [TaxId:1491] [225676] (22 PDB entries)

8. Domain d3rmxd2: 3rmx D:1068-1276 [249179]
   Other proteins in same PDB: d3rmxa1, d3rmxb1, d3rmxc1, d3rmxd1
   automated match to d3pmea2
   mutant

Details for d3rmxd2

PDB Entry: 3rmx, 2.75 Å

PDB Description: Crystal structure of HCR/D F1240A mutant

PDB Compounds: (D:) Botulinum neurotoxin type D

SCOPe Domain Sequences for d3rmxd2:

Sequence, based on SEQRES records:

>d3rmxd2 b.42.4.0 (D:1068-1276) automated matches {Clostridium botulinum [TaxId: 1491]}
snedinivyegqilrnvikdywgnplkfdteyyiindnyidryiapesnvlvlvqypdrs
klytgnpitiksvsdknpysrilngdniilhmlynsrkymiirdtdtiyatqggecsqnc
vyalklqsnlgnygigifsiknivsknkycsqifssfrentmlladiykpwrasfknayt
pvavtnyetkllstssfwkfisrdpgwve

Sequence, based on observed residues (ATOM records):

>d3rmxd2 b.42.4.0 (D:1068-1276) automated matches {Clostridium botulinum [TaxId: 1491]}
snedinivyegqilrnvikdywgnplkfdteyyiindnyidryiapesnvlvlvqypdrs
klytgnpitiksvsdknpysrilngdniilhmlynsrkymiirdtdtiyacsqncvyalk
lqsnlgnygigifsiknivsknkycsqifssfrentmlladiykpwrasfknaytpvavt
nyetkllstssfwkfisrdpgwve

Timeline for d3rmxd2:

• d3rmxd2 first appeared in SCOPe 2.04
  
• d3rmxd2 appears in SCOPe 2.07