Lineage for d3r8kd_ (3r8k D:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2956515Fold d.60: Probable bacterial effector-binding domain [55135] (1 superfamily)
    duplication of beta-alpha-beta(2) motif: antiparallel beta sheet forms barrel (n=6, S=12)
  4. 2956516Superfamily d.60.1: Probable bacterial effector-binding domain [55136] (5 families) (S)
  5. 2956552Family d.60.1.0: automated matches [254313] (1 protein)
    not a true family
  6. 2956553Protein automated matches [254719] (1 species)
    not a true protein
  7. 2956554Species Human (Homo sapiens) [TaxId:9606] [256053] (3 PDB entries)
  8. 2956562Domain d3r8kd_: 3r8k D: [249063]
    automated match to d2gova1

Details for d3r8kd_

PDB Entry: 3r8k (more details), 2.85 Å

PDB Description: Crystal structure of human SOUL protein (hexagonal form)
PDB Compounds: (D:) Heme-binding protein 2

SCOPe Domain Sequences for d3r8kd_:

Sequence, based on SEQRES records: (download)

>d3r8kd_ d.60.1.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
avetpgwkapedagpqpgsyeirhygpakwvstsvesmdwdsaiqtgftklnsyiqgkne
kemkikmtapvtsyvepgsgpfsestitislyipseqqfdpprplesdvfiedraemtvf
vrsfdgfssaqknqeqlltlasilredgkvfdekvyytagynspvkllnrnnevwliqkn

Sequence, based on observed residues (ATOM records): (download)

>d3r8kd_ d.60.1.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
avetpgwkapegsyeirhygpakwvstsvesmdwdsaiqtgftklnsyiqgknekemkik
mtapvtsyvepgsgpfsestitislyipseqqfdpprplesdvfiedraemtvfvrsfdg
fssaqknqeqlltlasilredgkvfdekvyytagynspvkllnrnnevwliqkn

SCOPe Domain Coordinates for d3r8kd_:

Click to download the PDB-style file with coordinates for d3r8kd_.
(The format of our PDB-style files is described here.)

Timeline for d3r8kd_: