Lineage for d3q4db2 (3q4d B:125-368)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2086988Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 2087392Family c.1.11.0: automated matches [227196] (1 protein)
    not a true family
  6. 2087393Protein automated matches [226923] (72 species)
    not a true protein
  7. 2087618Species Cytophaga hutchinsonii [TaxId:269798] [256030] (2 PDB entries)
  8. 2087620Domain d3q4db2: 3q4d B:125-368 [248767]
    Other proteins in same PDB: d3q4da1, d3q4db1, d3q4dc1, d3q4dd1, d3q4de1, d3q4df1, d3q4dg1, d3q4dh1, d3q4di1
    automated match to d2p8ba2
    complexed with ala, dal, mg

Details for d3q4db2

PDB Entry: 3q4d (more details), 3 Å

PDB Description: Crystal structure of dipeptide epimerase from Cytophaga hutchinsonii complexed with Mg and dipeptide D-Ala-L-Ala
PDB Compounds: (B:) Mandelate racemase/muconate lactonizing enzyme family; possible chloromuconate cycloisomerase

SCOPe Domain Sequences for d3q4db2:

Sequence; same for both SEQRES and ATOM records: (download)

>d3q4db2 c.1.11.0 (B:125-368) automated matches {Cytophaga hutchinsonii [TaxId: 269798]}

SCOPe Domain Coordinates for d3q4db2:

Click to download the PDB-style file with coordinates for d3q4db2.
(The format of our PDB-style files is described here.)

Timeline for d3q4db2: