SCOPe 2.04: Domain d3pu1b_: 3pu1 B:

Lineage for d3pu1b_ (3pu1 B:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.260: Rhabdovirus nucleoprotein-like [140808] (1 superfamily)
   multihelical, consist of two helical domains; each domain contains a buried helix

4. Superfamily a.260.1: Rhabdovirus nucleoprotein-like [140809] (1 family)
   automatically mapped to Pfam PF00945

5. Family a.260.1.1: Rhabdovirus nucleocapsid protein [140810] (2 proteins)
   Pfam PF00945; RNA-binding homooligomeric protein

6. Protein Nucleoprotein [140811] (2 species)

7. Species Vesicular stomatitis indiana virus [TaxId:11277] [140813] (4 PDB entries)
   Uniprot P03521 2-422

8. Domain d3pu1b_: 3pu1 B: [248650]
   automated match to d2gica1
   protein/RNA complex; complexed with ium

Details for d3pu1b_

PDB Entry: 3pu1, 3.14 Å

PDB Description: crystal structure of a vesicular stomatitis virus nucleocapsid-polyg complex

PDB Compounds: (B:) nucleoprotein

SCOPe Domain Sequences for d3pu1b_:

Sequence, based on SEQRES records:

>d3pu1b_ a.260.1.1 (B:) Nucleoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]}
svtvkriidntvivpklpanedpveypadyfrkskeiplyinttkslsdlrgyvyqglks
gnvsiihvnsylygalkdirgkldkdwssfginigkagdtigifdlvslkaldgvlpdgv
sdasrtsaddkwlplyllglyrvgrtqmpeyrkklmdgltnqckmineqfeplvpegrdi
fdvwgndsnytkivaavdmffhmfkkhecasfrygtivsrfkdcaalatfghlckitgms
tedvttwilnrevademvqmmlpgqeidkadsympylidfglsskspyssvknpafhfwg
qltalllrstrarnarqpddieytslttagllyayavgssadlaqqfcvgdnkytpddst
gglttnappqgrdvvewlgwfedqnrkptpdmmqyakravmslqglrektigkyaksefd
k

Sequence, based on observed residues (ATOM records):

>d3pu1b_ a.260.1.1 (B:) Nucleoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]}
svtvkriidntvivpklpanedpveypadyfrkskeiplyinttkslsdlrgyvyqglks
gnvsiihvnsylygalkdirgkldkdwssfginigkagdtigifdlvslkaldgvlpdgv
sdasrtsaddkwlplyllglyrvgrtqmpeyrkklmdgltnqckmineqfeplvpegrdi
fdvwgndsnytkivaavdmffhmfkkhecasfrygtivsrfkdcaalatfghlckitgms
tedvttwilnrevademvqmmlpgqeidkadsympylidfglsskspyssvknpafhfwg
qltalllrstrarnarqpddieytslttagllyayavgssadlaqqfcvgdnkytpdttn
appqgrdvvewlgwfedqnrkptpdmmqyakravmslqglrektigkyaksefdk

Timeline for d3pu1b_:

• d3pu1b_ is new in SCOPe 2.04-stable
  
• d3pu1b_ appears in SCOPe 2.05
  
• d3pu1b_ appears in the current release, SCOPe 2.08