Lineage for d3ptod_ (3pto D:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2016186Fold a.260: Rhabdovirus nucleoprotein-like [140808] (1 superfamily)
    multihelical, consist of two helical domains; each domain contains a buried helix
  4. 2016187Superfamily a.260.1: Rhabdovirus nucleoprotein-like [140809] (1 family) (S)
    automatically mapped to Pfam PF00945
  5. 2016188Family a.260.1.1: Rhabdovirus nucleocapsid protein [140810] (2 protein domains)
    Pfam PF00945; RNA-binding homooligomeric protein
  6. 2016189Protein Nucleoprotein [140811] (2 species)
  7. 2016213Species Vesicular stomatitis indiana virus [TaxId:11277] [140813] (4 PDB entries)
    Uniprot P03521 2-422
  8. 2016227Domain d3ptod_: 3pto D: [248647]
    automated match to d2gica1
    complexed with ium

Details for d3ptod_

PDB Entry: 3pto (more details), 3.01 Å

PDB Description: Crystal Structure of an empty Vesicular Stomatitis Virus Nucleocapsid Protein Complex
PDB Compounds: (D:) nucleoprotein

SCOPe Domain Sequences for d3ptod_:

Sequence, based on SEQRES records: (download)

>d3ptod_ a.260.1.1 (D:) Nucleoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]}
svtvkriidntvivpklpanedpveypadyfrkskeiplyinttkslsdlrgyvyqglks
gnvsiihvnsylygalkdirgkldkdwssfginigkagdtigifdlvslkaldgvlpdgv
sdasrtsaddkwlplyllglyrvgrtqmpeyrkklmdgltnqckmineqfeplvpegrdi
fdvwgndsnytkivaavdmffhmfkkhecasfrygtivsrfkdcaalatfghlckitgms
tedvttwilnrevademvqmmlpgqeidkadsympylidfglsskspyssvknpafhfwg
qltalllrstrarnarqpddieytslttagllyayavgssadlaqqfcvgdnkytpddst
gglttnappqgrdvvewlgwfedqnrkptpdmmqyakravmslqglrektigkyaksefd
k

Sequence, based on observed residues (ATOM records): (download)

>d3ptod_ a.260.1.1 (D:) Nucleoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]}
svtvkriidntvivpklpanedpveypadyfrkskeiplyinttkslsdlrgyvyqglks
gnvsiihvnsylygalkdirgkldkdwssfginigkagdtigifdlvslkaldgvlpdgv
sdasrtsaddkwlplyllglyrvgrtqmpeyrkklmdgltnqckmineqfeplvpegrdi
fdvwgndsnytkivaavdmffhmfkkhecasfrygtivsrfkdcaalatfghlckitgms
tedvttwilnrevademvqmmlpgqeidkadsympylidfglsskspyssvknpafhfwg
qltalllrstrarnarqpddieytslttagllyayavgssadlaqqfcvgdnkytpdltt
nappqgrdvvewlgwfedqnrkptpdmmqyakravmslqglrektigkyaksefdk

SCOPe Domain Coordinates for d3ptod_:

Click to download the PDB-style file with coordinates for d3ptod_.
(The format of our PDB-style files is described here.)

Timeline for d3ptod_: