SCOPe 2.08: Domain d3p83e1: 3p83 E:1-205

Lineage for d3p83e1 (3p83 E:1-205)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (18 families)
   consists of one domain of this fold

5. Family c.55.3.0: automated matches [191357] (1 protein)
   not a true family

6. Protein automated matches [190396] (40 species)
   not a true protein

7. Species Archaeoglobus fulgidus [TaxId:2234] [256016] (1 PDB entry)

8. Domain d3p83e1: 3p83 E:1-205 [248437]
   Other proteins in same PDB: d3p83a1, d3p83a2, d3p83b1, d3p83b2, d3p83c1, d3p83c2, d3p83d2, d3p83e2
   automated match to d2dffa_
   protein/DNA complex; protein/RNA complex

Details for d3p83e1

PDB Entry: 3p83, 3.05 Å

PDB Description: Structure of the PCNA:RNase HII complex from Archaeoglobus fulgidus.

PDB Compounds: (E:) ribonuclease hii

SCOPe Domain Sequences for d3p83e1:

Sequence, based on SEQRES records:

>d3p83e1 c.55.3.0 (E:1-205) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}
mkagideagkgcvigplvvagvacsdedrlrklgvkdskklsqgrreelaeeirkicrte
vlkvspenldermaaktineilkecyaeiilrlkpeiayvdspdviperlsreleeitgl
rvvaehkadekyplvaaasiiakverereierlkekfgdfgsgyasdprtrevlkewias
gripscvrmrwktvsnlrqktlddf

Sequence, based on observed residues (ATOM records):

>d3p83e1 c.55.3.0 (E:1-205) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}
mkagideagkgcvigplvvagvacsdedrlrklgvkdskklsqgrreelaeeirkicrte
vlkvspenldermaaktineilkecyaeiilrlkpeiayvdspdviperlsreleeitgl
rvvaehkadekyplvaaasiiakverereierlkekfgdfgsgyasdprtrevlkewias
gripscvrmrwklrqktlddf

Timeline for d3p83e1:

• d3p83e1 first appeared in SCOPe 2.04, called d3p83e_
  
• d3p83e1 appears in SCOPe 2.07