SCOPe 2.08: Domain d3nwfa_: 3nwf A:

Lineage for d3nwfa_ (3nwf A:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.76: Viral glycoprotein ectodomain-like [161007] (1 superfamily)
   complex fold; contains three rigid, mostly-beta domains and an alpha-helical region, acting as a conformatiomal switch ("fusion stalk")

4. Superfamily e.76.1: Viral glycoprotein ectodomain-like [161008] (3 families)

5. Family e.76.1.1: Glycoprotein B-like [161009] (1 protein)
   Pfam PF00606; Herpesvirus Glycoprotein B

6. Protein Glycoprotein B [161010] (1 species)

7. Species Human herpesvirus 1 [TaxId:10298] [161011] (7 PDB entries)
   Uniprot P06437 111-725

8. Domain d3nwfa_: 3nwf A: [248089]
   automated match to d2gumb_
   complexed with mry, na, nag

Details for d3nwfa_

PDB Entry: 3nwf, 3 Å

PDB Description: glycoprotein b from herpes simplex virus type 1, low-ph

PDB Compounds: (A:) Envelope glycoprotein B

SCOPe Domain Sequences for d3nwfa_:

Sequence, based on SEQRES records:

>d3nwfa_ e.76.1.1 (A:) Glycoprotein B {Human herpesvirus 1 [TaxId: 10298]}
dikaentdanfyvcppptgatvvqfeqprrcptrpegqnytegiavvfkeniapykfkat
myykdvtvsqvwfghrysqfmgifedrapvpfeevidkinakgvcrstakyvrnnletta
fhrddhetdmelkpanaatrtsrgwhttdlkynpsrveafhrygttvnciveevdarsvy
pydefvlatgdfvymspfygyregshtehtsyaadrfkqvdgfyardlttkaratapttr
nllttpkftvawdwvpkrpsvctmtkwqevdemlrseyggsfrfssdaisttfttnltey
plsrvdlgdcigkdardamdrifarrynathikvgqpqyylanggfliayqpllsntlae
lyvrehlreqsrkppnptppppgasanasverikttssiefarlqftynhiqrhvndmlg
rvaiawcelqnheltlwnearklnpnaiasvtvgrrvsarmlgdvmavstcvpvaadnvi
vqnsmrissrpgacysrplvsfryedqgplvegqlgennelrltrdaiepctvghrryft
fgggyvyfeeyayshqlsradittvstfidlnitmledhefvplevytrheikdsglldy
tevqrrnqlhdlrfadidtvih

Sequence, based on observed residues (ATOM records):

>d3nwfa_ e.76.1.1 (A:) Glycoprotein B {Human herpesvirus 1 [TaxId: 10298]}
dikaentdanfyvcppptgatvvqfeqprrcptrpegqnytegiavvfkeniapykfkat
myykdvtvsqvwfghrysqfmgifedrapvpfeevidkinakgvcrstakyvrnnletta
fhrddhetdmelkpanaatrtsrgwhttdlkynpsrvehrygttvnciveevdarsvypy
defvlatgdfvymspfygyregshtehtsyaadrfkqvdgfyardlttkaratapttrnl
lttpkftvawdwvpkrpsvctmtkwqevdemlrseyggsfrfssdaisttfttnlteypl
srvdlgdcigkdardamdrifarrynathikvgqpqyylanggfliayqpllsntlaely
vrehlreqsrkpverikttssiefarlqftynhiqrhvndmlgrvaiawcelqnheltlw
nearklnpnaiasvtvgrrvsarmlgdvmavstcvpvaadnvivqnsmrissrpgacysr
plvsfryedqgplvegqlgennelrltrdaiepctvghrryftfgggyvyfeeyayshql
sradittvstfidlnitmledhefvplevytrheikdsglldytevqrrnqlhdlrfadi
dtvih

Timeline for d3nwfa_:

• d3nwfa_ first appeared in SCOPe 2.04
  
• d3nwfa_ appears in SCOPe 2.07