SCOPe 2.04: Domain d3nudb_: 3nud B:

Lineage for d3nudb_ (3nud B:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.8: Class-II DAHP synthetase [141840] (2 proteins)
   Pfam PF01474

6. Protein Probable DAHP synthetase AroG, phenylalanine-repressible [141841] (1 species)

7. Species Mycobacterium tuberculosis [TaxId:1773] [141842] (5 PDB entries)
   Uniprot O53512 1-462

8. Domain d3nudb_: 3nud B: [248032]
   automated match to d3nv8b_
   complexed with phe, po4

Details for d3nudb_

PDB Entry: 3nud, 3 Å

PDB Description: The structure of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase from mycobacterium tuberculosis complexed with phenylalanine

PDB Compounds: (B:) Probable 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase AroG

SCOPe Domain Sequences for d3nudb_:

Sequence, based on SEQRES records:

>d3nudb_ c.1.10.8 (B:) Probable DAHP synthetase AroG, phenylalanine-repressible {Mycobacterium tuberculosis [TaxId: 1773]}
gamnwtvdipidqlpslpplptdlrtrldaalakpaaqqptwpadqalamrtvlesvppv
tvpseivrlqeqlaqvakgeafllqggdcaetfmdntephirgnvrallqmavvltygas
mpvvkvariagqyakprsadidalglrsyrgdmingfapdaaarehdpsrlvrayanasa
amnlvraltssglaslhlvhdwnrefvrtspagaryealateidrglrfmsacgvadrnl
qtaeiyashealvldyeramlrlsdgddgepqlfdlsahtvwigertrqidgahiafaqv
ianpvgvklgpnmtpelaveyverldphnkpgrltlvsrmgnhkvrdllppivekvqatg
hqviwqcdpmhgnthesstgfktrhfdrivdevqgffevhralgthpggihveitgenvt
eclggaqdisetdlagryetacdprlntqqslelaflvaemlrd

Sequence, based on observed residues (ATOM records):

>d3nudb_ c.1.10.8 (B:) Probable DAHP synthetase AroG, phenylalanine-repressible {Mycobacterium tuberculosis [TaxId: 1773]}
gamnwtvdipipplptdlrtrldaalakpaaqqptwpadqalamrtvlesvppvtvpsei
vrlqeqlaqvakgeafllqggdcaetfmdntephirgnvrallqmavvltygasmpvvkv
ariagqyakprsadidalglrsyrgdmingfapdaaarehdpsrlvrayanasaamnlvr
altssglaslhlvhdwnrefvrtspagaryealateidrglrfmsacgvadrnlqtaeiy
ashealvldyeramlrlsdgddgepqlfdlsahtvwigertrqidgahiafaqvianpvg
vklgpnmtpelaveyverldphnkpgrltlvsrmgnhkvrdllppivekvqatghqviwq
cdpmhgnthesfktrhfdrivdevqgffevhralgthpggihveitgenvtagryetacd
prlntqqslelaflvaemlrd

Timeline for d3nudb_:

• d3nudb_ is new in SCOPe 2.04-stable
  
• d3nudb_ appears in SCOPe 2.05
  
• d3nudb_ appears in the current release, SCOPe 2.08, called d3nudb1