SCOPe 2.04: Domain d3ngzb_: 3ngz B:

Lineage for d3ngzb_ (3ngz B:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (15 families)
   consists of one domain of this fold

5. Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (16 proteins)
   contains Pfam PF00929

6. Protein automated matches [190162] (4 species)
   not a true protein

7. Species Escherichia coli [TaxId:562] [187263] (13 PDB entries)

8. Domain d3ngzb_: 3ngz B: [247922]
   automated match to d2f96a1
   protein/DNA complex; protein/RNA complex; complexed with co, mg

Details for d3ngzb_

PDB Entry: 3ngz, 2.1 Å

PDB Description: Crystal structure of RNase T in complex with a non-preferred ssDNA (GC) with one Mg in the active site

PDB Compounds: (B:) Ribonuclease T

SCOPe Domain Sequences for d3ngzb_:

Sequence; same for both SEQRES and ATOM records:

>d3ngzb_ c.55.3.5 (B:) automated matches {Escherichia coli [TaxId: 562]}
tglcdrfrgfypvvidvetagfnaktdalleiaaitlkmdeqgwlmpdttlhfhvepfvg
anlqpealafngidpndpdrgavsgyealheifkvvrkgikasgcnraimvahnanfdhs
fmmaaaeraslkrnpfhpfatfdtaalaglalgqtvlskacqtagmdfdstqahsalydt
ertavlfceivnrwkrlggwplsaae

Timeline for d3ngzb_:

• d3ngzb_ is new in SCOPe 2.04-stable
  
• d3ngzb_ appears in SCOPe 2.05
  
• d3ngzb_ appears in the current release, SCOPe 2.08