SCOPe 2.04: Domain d3m85e1: 3m85 E:6-153

Lineage for d3m85e1 (3m85 E:6-153)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
   core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover

4. Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)

5. Family d.14.1.4: Ribonuclease PH domain 1-like [54229] (11 proteins)

6. Protein automated matches [232811] (2 species)
   not a true protein

7. Species Archaeoglobus fulgidus [TaxId:2234] [232894] (2 PDB entries)

8. Domain d3m85e1: 3m85 E:6-153 [247618]
   Other proteins in same PDB: d3m85d2, d3m85e2, d3m85f2, d3m85g1, d3m85g2, d3m85h1, d3m85h2, d3m85i1, d3m85i2
   automated match to d2ba1d1
   protein/RNA complex; complexed with zn

Details for d3m85e1

PDB Entry: 3m85, 3 Å

PDB Description: archaeoglobus fulgidus exosome y70a with rna bound to the active site

PDB Compounds: (E:) probable exosome complex exonuclease 1

SCOPe Domain Sequences for d3m85e1:

Sequence; same for both SEQRES and ATOM records:

>d3m85e1 d.14.1.4 (E:6-153) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}
ekpeklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgprevhpe
hlqdpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfprsaidi
fvevlqadagsrtaclnaasvalvdagv

Timeline for d3m85e1:

• d3m85e1 is new in SCOPe 2.04-stable
  
• d3m85e1 appears in SCOPe 2.05
  
• d3m85e1 appears in the current release, SCOPe 2.08