Lineage for d3ly6a1 (3ly6 A:4-145)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2032114Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2032683Family b.1.18.9: Transglutaminase N-terminal domain [81289] (1 protein)
  6. 2032684Protein Transglutaminase N-terminal domain [49235] (4 species)
    elaborated with many loop insertions in the common fold
  7. 2032722Species Human (Homo sapiens), tissue isozyme [TaxId:9606] [74844] (4 PDB entries)
    GDP-binding protein
  8. 2032730Domain d3ly6a1: 3ly6 A:4-145 [247544]
    Other proteins in same PDB: d3ly6a2, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b2, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c2, d3ly6c3, d3ly6c4, d3ly6c5
    automated match to d2q3za1
    complexed with atp

Details for d3ly6a1

PDB Entry: 3ly6 (more details), 3.14 Å

PDB Description: Crystal structure of human transglutaminase 2 complex with adenosine 5' Triphosphate
PDB Compounds: (A:) Protein-glutamine gamma-glutamyltransferase 2

SCOPe Domain Sequences for d3ly6a1:

Sequence, based on SEQRES records: (download)

>d3ly6a1 b.1.18.9 (A:4-145) Transglutaminase N-terminal domain {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
elvlercdleletngrdhhtadlcreklvvrrgqpfwltlhfegrnyeasvdsltfsvvt
gpapsqeagtkarfplrdaveegdwtatvvdqqdctlslqlttpanapiglyrlsleast
gyqgssfvlghfillfnawcpa

Sequence, based on observed residues (ATOM records): (download)

>d3ly6a1 b.1.18.9 (A:4-145) Transglutaminase N-terminal domain {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
elvlercdleletngrdhhtadlcreklvvrrgqpfwltlhfegrnyeasvdsltfsvvt
gpapsqeagtkarfplrdavgdwtatvvdqqdctlslqlttpanapiglyrlsleastgy
qgssfvlghfillfnawcpa

SCOPe Domain Coordinates for d3ly6a1:

Click to download the PDB-style file with coordinates for d3ly6a1.
(The format of our PDB-style files is described here.)

Timeline for d3ly6a1: