SCOPe 2.08: Domain d3koda_: 3kod A:

Lineage for d3koda_ (3kod A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.110: DTD-like [69499] (1 superfamily)
   beta(2)-(alpha-beta)2-beta(3); 3 layers, a/b/b; some topological similarity to the N-terminal domain of MinC

4. Superfamily c.110.1: DTD-like [69500] (3 families)
   active form is a dimer

5. Family c.110.1.0: automated matches [191422] (1 protein)
   not a true family

6. Protein automated matches [190596] (6 species)
   not a true protein

7. Species Plasmodium falciparum [TaxId:36329] [196467] (14 PDB entries)

8. Domain d3koda_: 3kod A: [247247]
   automated match to d4nbia_
   complexed with dsn

Details for d3koda_

PDB Entry: 3kod, 3 Å

PDB Description: dtd from plasmodium falciparum in complex with d-serine

PDB Compounds: (A:) D-tyrosyl-tRNA(Tyr) deacylase

SCOPe Domain Sequences for d3koda_:

Sequence, based on SEQRES records:

>d3koda_ c.110.1.0 (A:) automated matches {Plasmodium falciparum [TaxId: 36329]}
mrvviqrvkgailsvrkenigenekeleiiseiknglicflgihkndtwedalyiirkcl
nlrlwnndnktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkii
defkkqynddkikigkfgnymnidvtndgpvtiyidthdi

Sequence, based on observed residues (ATOM records):

>d3koda_ c.110.1.0 (A:) automated matches {Plasmodium falciparum [TaxId: 36329]}
mrvviqrvkgailsvreleiiseiknglicflgihkndtwedalyiirkclnlrlwnndn
ktwdknvkdlnyellivsqftlfgntkkgnkpdfhlakepnealifynkiidefkkqynd
dkikigkfgnymnidvtndgpvtiyidthdi

Timeline for d3koda_:

• d3koda_ first appeared in SCOPe 2.04
  
• d3koda_ appears in SCOPe 2.07