Lineage for d3kics_ (3kic S:)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1812227Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 1813070Superfamily b.121.5: ssDNA viruses [88645] (3 families) (S)
  5. 1813089Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins)
    automatically mapped to Pfam PF00740
  6. 1813115Protein automated matches [190920] (6 species)
    not a true protein
  7. 1813215Species Adeno-associated virus 3b [TaxId:68742] [255908] (2 PDB entries)
  8. 1813234Domain d3kics_: 3kic S: [247182]
    automated match to d1lp3a_
    complexed with d5m

Details for d3kics_

PDB Entry: 3kic (more details), 2.6 Å

PDB Description: crystal structure of adeno-associated virus serotype 3b
PDB Compounds: (S:) Capsid protein VP1

SCOPe Domain Sequences for d3kics_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3kics_ b.121.5.2 (S:) automated matches {Adeno-associated virus 3b [TaxId: 68742]}
gadgvgnssgnwhcdsqwlgdrvittstrtwalptynnhlykqissqsgasndnhyfgys
tpwgyfdfnrfhchfsprdwqrlinnnwgfrpkklsfklfniqvkevtqndgtttiannl
tstvqvftdseyqlpyvlgsahqgclppfpadvfmvpqygyltlnngsqavgrssfycle
yfpsqmlrtgnnfqfsytfedvpfhssyahsqsldrlmnplidqylyylnrtqgttsgtt
nqsrllfsqagpqsmslqarnwlpgpcyrqqrlsktandnnnsnfpwtaaskyhlngrds
lvnpgpamashkddeekffpmhgnlifgkegttasnaeldnvmitdeeeirttnpvateq
ygtvannlqssntapttrtvndqgalpgmvwqdrdvylqgpiwakiphtdghfhpsplmg
gfglkhpppqimikntpvpanppttfspakfasfitqystgqvsveiewelqkenskrwn
peiqytsnynksvnvdftvdtngvyseprpigtryltrnl

SCOPe Domain Coordinates for d3kics_:

Click to download the PDB-style file with coordinates for d3kics_.
(The format of our PDB-style files is described here.)

Timeline for d3kics_: