Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) consists of one domain of this fold |
Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (17 proteins) contains Pfam PF00929 |
Protein automated matches [190162] (5 species) not a true protein |
Species Escherichia coli [TaxId:562] [187263] (14 PDB entries) |
Domain d3k5na1: 3k5n A:1-389 [247113] Other proteins in same PDB: d3k5na2, d3k5nb2, d3k5nb3 automated match to d1q8ia1 protein/DNA complex |
PDB Entry: 3k5n (more details), 3.15 Å
SCOPe Domain Sequences for d3k5na1:
Sequence, based on SEQRES records: (download)
>d3k5na1 c.55.3.5 (A:1-389) automated matches {Escherichia coli [TaxId: 562]} maqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqge qgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfi tspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivym lgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaery rlplrlgrdnselewrehgfkngvffaqakgrliidgiealksafwnfssfsletvaqel lgegksidnpwdrmdeidrrfaedkpalatynlkncelvtqifhkteimpflleratvng lpvdrhggsvaafghlyfprmhragyvap
>d3k5na1 c.55.3.5 (A:1-389) automated matches {Escherichia coli [TaxId: 562]} maqagfiltrhwrdtpqgtevsfwlatdngplqvtlapqesvafipadqvpraqhilqge qgfrltplalkdfhrqpvyglycrahrqlmnyekrlreggvtvyeadvrpperylmerfi tspvwvegdmhngtivnarlkphpdyrpplkwvsidiettrhgelyciglegcgqrivym lgpengdassldfeleyvasrpqlleklnawfanydpdviigwnvvqfdlrmlqkhaery rlplrlgrdnselewffaqakgrliidgiealksafwnfssfsletvaqellgegwdrmd eidrrfaedkpalatynlkncelvtqifhkteimpflleratvnglpvdrhggsvaafgh lyfprmhragyvap
Timeline for d3k5na1: