Lineage for d3ibva_ (3ibv A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2006336Fold a.118: alpha-alpha superhelix [48370] (25 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2006337Superfamily a.118.1: ARM repeat [48371] (26 families) (S)
  5. 2006820Family a.118.1.19: Exportin HEAT-like repeat [117002] (2 protein domains)
    Pfam PF08389, Pfam PF08767; full length proteins have several extra helices at C-terminus
  6. 2006826Protein Exportin-T (Xpot) [254387] (1 species)
  7. 2006827Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [254820] (1 PDB entry)
  8. 2006828Domain d3ibva_: 3ibv A: [246901]
    complexed with ca

Details for d3ibva_

PDB Entry: 3ibv (more details), 3.1 Å

PDB Description: Karyopherin cytosolic state
PDB Compounds: (A:) Exportin-T

SCOPe Domain Sequences for d3ibva_:

Sequence, based on SEQRES records: (download)

>d3ibva_ a.118.1.19 (A:) Exportin-T (Xpot) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
msaqdvenaveaaldpsvgpiikqqatdfigslrssstgwkicheifsektkykpstrli
clqtlsekvrewnnesnllelqmirdsvwsyikelsfldepayisnavqhlltllflqly
psnwndffaslqgviaassqsefsnfylkvllsigdeiadslvlktdvqiqkdnlvkdai
randmsdivsfvyemmlaysnaknygtvglclqvyaqwvswininlivnepcmnllysfl
qieelrcaacetmteivnkkmkpleklnllnilnlnlffsksqeqstdpnfdehvaklin
aqgvelvaiksdpselspelkencsfqlynlfpylirylsddydetstavfpflsdllvs
lrkessskelsaslkeflkslleaiikkmkydesqewdddpdseeeaefqemrkklkifq
dtinsidsslfssymysaitsslstaatlspenswqliefalyetyifgeglrgpdaffn
evdksptvlsqilalvttsqvcrhphplvqllymeilvryasffdyesaaipalieyfvg
prgihntnervrprawylfyrfvksikkqvvnytesslamlgdllnisvspvtdmdapvp
tlnssirnsdfnsqlylfetvgvlissgnltpeeqalycdslinaligkanaalssdlsa
leniisvycslmaignfakgfpargseevawlasfnkasdeiflildrmgfnedirgavr
ftsgriinvvgpdmlpkvpqlisillnsidmnelvdvlsfisqlihiykdnmmeitnrml
ptllmrifsslsaapqgtddavkqndlrksyisfilqllnkgfgsilfteenqvyfdpli
nsilhfanlvgepatqkssialvskmvslwggkdgiagfenftlsltplcfempvnpnfn
trdgqslvvlgelaglqkiileklgdiyksylvtvyfptvnfpdvmaseylqalsnldsr
sfkqffqkfiqalks

Sequence, based on observed residues (ATOM records): (download)

>d3ibva_ a.118.1.19 (A:) Exportin-T (Xpot) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
msaqdvenaveaaldpsvgpiikqqatdfigslrssstgwkicheifsektkykpstrli
clqtlsekvrewnnesnllelqmirdsvwsyikelsfldepayisnavqhlltllflqly
psnwndffaslqgviaassqsefsnfylkvllsigdeiadslvlktdvqiqkdnlvkdai
randmsdivsfvyemmlaysnaknygtvglclqvyaqwvswininlivnepcmnllysfl
qieelrcaacetmteivnkkmkpleklnllnilnlnlffsktdpnfdehvaklinaqgve
lvaiksdpsspelkencsfqlynlfpylirylsddydetstavfpflsdllvslrkesss
kelsaslkeflkslleaiikkmkydesqewdddpdseeeaefqemrkklkifqdtinsid
sslfssymysaitsslstaatlspenswqliefalyetyifgeglrgpdaffnevdkspt
vlsqilalvttsqvcrhphplvqllymeilvryasffdyesaaipalieyfvgprgihnt
nervrprawylfyrfvksikkqvvnytesslamlgdllnisvspvtdapvptlnssirns
dfnsqlylfetvgvlissgnltpeeqalycdslinaligkanaalssdlseniisvycsl
maignfakgfpargeevawlasfnkasdeiflildrmgfnedirgavrftsgriinvvgp
dmlpkvpqlisillnsidmnelvdvlsfisqlihiykdnmmeitnrmlptllmrifssls
atddavkqndlrksyisfilqllnkgfgsilfteenqvyfdplinsilhfapatqkssia
lvskmvslagfenftlsltplcfempvnlvvlgelaglqkiileklgdiyksylvtvyfp
tdvmaseylqaiqalks

SCOPe Domain Coordinates for d3ibva_:

Click to download the PDB-style file with coordinates for d3ibva_.
(The format of our PDB-style files is described here.)

Timeline for d3ibva_: