SCOPe 2.08: Domain d3iam4_: 3iam 4:

Lineage for d3iam4_ (3iam 4:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.2: Nqo4-like [144028] (2 proteins)
   Pfam PF00346; Respiratory-chain NADH dehydrogenase, 49 Kd subunit

6. Protein automated matches [254688] (2 species)
   not a true protein

7. Species Thermus thermophilus HB8 [TaxId:300852] [255886] (3 PDB entries)

8. Domain d3iam4_: 3iam 4: [246785]
   Other proteins in same PDB: d3iam11, d3iam12, d3iam13, d3iam2_, d3iam31, d3iam32, d3iam33, d3iam34, d3iam5_, d3iam6_, d3iam7_, d3iam9_, d3iama1, d3iama2, d3iama3, d3iamb_, d3iamc1, d3iamc2, d3iamc3, d3iamc4, d3iame_, d3iamf_, d3iamg_, d3iamh_
   automated match to d2fug41
   complexed with ca, fes, fmn, mg, nai, sf4

Details for d3iam4_

PDB Entry: 3iam, 3.1 Å

PDB Description: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, reduced, 2 mol/ASU, with bound NADH

PDB Compounds: (4:) NADH-quinone oxidoreductase subunit 4

SCOPe Domain Sequences for d3iam4_:

Sequence, based on SEQRES records:

>d3iam4_ e.18.1.2 (4:) automated matches {Thermus thermophilus HB8 [TaxId: 300852]}
vmtlnvgpqhpsthgvlrlmvtlsgeevlevvphigylhtgfektmehrtylqnitytpr
mdylhsfahdlayalavekllgavvppraetirvilnelsrlashlvflgtglldlgalt
pffyafreretildlfewvtgqrfhhnyiriggvkedlpeefvpelkkllevlphridey
ealfaespifyerargvgvippevaidlgltggslrasgvnydvrkaypysgyetytfdv
plgergdvfdrmlvriremresvkiikqalerlepgpvrdpnpqitppprhlletsmeav
iyhfkhytegfhppkgevyvptesargelgyyivsdggsmpyrvkvrapsfvnlqslpya
ckgeqvpdmvaiiasldpvmgdvdr

Sequence, based on observed residues (ATOM records):

>d3iam4_ e.18.1.2 (4:) automated matches {Thermus thermophilus HB8 [TaxId: 300852]}
vmtlnvggvlrlmvtlsgeevlevvphigylhtgfektmehrtylqnitytprmdylhsf
ahdlayalavekllgavvppraetirvilnelsrlashlvflgtglldlgaltpffyafr
eretildlfewvtgqrfhhnyiriggvkedlpeefvpelkkllevlphrideyealfaes
pifyerargvgvippevaidlgltggslrasgvnydvrkaypysgyetytfdvplgergd
vfdrmlvriremresvkiikqalerlepgpvrdpnpqitppprhlletsmeaviyhfkhy
tegfhppkgevyvptesargelgyyivsdggsmpyrvkvrapsfvnlqslpyackgeqvp
dmvaiiasldpvmgdvdr

Timeline for d3iam4_:

• d3iam4_ first appeared in SCOPe 2.04
  
• d3iam4_ appears in SCOPe 2.07