SCOPe 2.08: Domain d3i9v4_: 3i9v 4:

Lineage for d3i9v4_ (3i9v 4:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.2: Nqo4-like [144028] (2 proteins)
   Pfam PF00346; Respiratory-chain NADH dehydrogenase, 49 Kd subunit

6. Protein automated matches [254688] (2 species)
   not a true protein

7. Species Thermus thermophilus HB8 [TaxId:300852] [255886] (3 PDB entries)

8. Domain d3i9v4_: 3i9v 4: [246759]
   Other proteins in same PDB: d3i9v11, d3i9v12, d3i9v13, d3i9v2_, d3i9v31, d3i9v32, d3i9v33, d3i9v34, d3i9v5_, d3i9v6_, d3i9v7_, d3i9v9_, d3i9va1, d3i9va2, d3i9va3, d3i9vb_, d3i9vc1, d3i9vc2, d3i9vc3, d3i9vc4, d3i9ve_, d3i9vf_, d3i9vg_, d3i9vh_
   automated match to d2fug41
   complexed with ca, fes, fmn, mn, sf4

Details for d3i9v4_

PDB Entry: 3i9v, 3.1 Å

PDB Description: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, oxidized, 2 mol/ASU

PDB Compounds: (4:) NADH-quinone oxidoreductase subunit 4

SCOPe Domain Sequences for d3i9v4_:

Sequence, based on SEQRES records:

>d3i9v4_ e.18.1.2 (4:) automated matches {Thermus thermophilus HB8 [TaxId: 300852]}
mtlnvgpqhpsthgvlrlmvtlsgeevlevvphigylhtgfektmehrtylqnitytprm
dylhsfahdlayalavekllgavvppraetirvilnelsrlashlvflgtglldlgaltp
ffyafreretildlfewvtgqrfhhnyiriggvkedlpeefvpelkkllevlphrideye
alfaespifyerargvgvippevaidlgltggslrasgvnydvrkaypysgyetytfdvp
lgergdvfdrmlvriremresvkiikqalerlepgpvrdpnpqitppprhlletsmeavi
yhfkhytegfhppkgevyvptesargelgyyivsdggsmpyrvkvrapsfvnlqslpyac
kgeqvpdmvaiiasldpvmgdvdr

Sequence, based on observed residues (ATOM records):

>d3i9v4_ e.18.1.2 (4:) automated matches {Thermus thermophilus HB8 [TaxId: 300852]}
mtlnvggvlrlmvtlsgeevlevvphigylhtgfektmehrtylqnitytprmdylhsfa
hdlayalavekllgavvppraetirvilnelsrlashlvflgtglldlgaltpffyafre
retildlfewvtgqrfhhnyiriggvkedlpeefvpelkkllevlphrideyealfaesp
ifyerargvgvippevaidlgltggslrasgvnydvrkaypysgyetytfdvplgergdv
fdrmlvriremresvkiikqalerlepgpvrdpnpqitppprhlletsmeaviyhfkhyt
egfhppkgevyvptesargelgyyivsdggsmpyrvkvrapsfvnlqslpyackgeqvpd
mvaiiasldpvmgdvdr

Timeline for d3i9v4_:

• d3i9v4_ first appeared in SCOPe 2.04
  
• d3i9v4_ appears in SCOPe 2.07