Lineage for d3gdxa1 (3gdx A:10-91)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1999012Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families) (S)
    contains one classic and one pseudo HhH motifs
  5. 1999013Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (3 protein domains)
  6. 1999014Protein DNA polymerase beta, N-terminal (8 kD)-domain [47804] (2 species)
    topologically similar to the second domain
  7. 1999015Species Human (Homo sapiens) [TaxId:9606] [47805] (145 PDB entries)
    Uniprot P06746
  8. 1999054Domain d3gdxa1: 3gdx A:10-91 [246281]
    Other proteins in same PDB: d3gdxa2, d3gdxa3
    automated match to d1tv9a1
    protein/DNA complex; complexed with 4bd, cl, mg, na

Details for d3gdxa1

PDB Entry: 3gdx (more details), 2.2 Å

PDB Description: Dna polymerase beta with a gapped DND substrate and dTMP(CF2)PP
PDB Compounds: (A:) DNA polymerase beta

SCOPe Domain Sequences for d3gdxa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3gdxa1 a.60.6.1 (A:10-91) DNA polymerase beta, N-terminal (8 kD)-domain {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d3gdxa1:

Click to download the PDB-style file with coordinates for d3gdxa1.
(The format of our PDB-style files is described here.)

Timeline for d3gdxa1: