SCOPe 2.08: Domain d3fbma_: 3fbm A:

Lineage for d3fbma_ (3fbm A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.9: Birnaviridae-like VP [141109] (2 proteins)
   dsRNA virus but unlike the other dsRNA viruses has a genomic arrangement and genomic replication strategy similar to +sRNA viruses; includes Pfam PF01766; Birnavirus VP2 protein

6. Protein automated matches [190599] (2 species)
   not a true protein

7. Species Avian infectious bursal disease virus [TaxId:10995] [255826] (1 PDB entry)

8. Domain d3fbma_: 3fbm A: [246076]
   automated match to d2gsya1
   complexed with ca; mutant

Details for d3fbma_

PDB Entry: 3fbm, 3.1 Å

PDB Description: d431n mutant vp2 protein of infectious bursal disease virus; derived t=1 particles

PDB Compounds: (A:) Polyprotein

SCOPe Domain Sequences for d3fbma_:

Sequence, based on SEQRES records:

>d3fbma_ b.121.4.9 (A:) automated matches {Avian infectious bursal disease virus [TaxId: 10995]}
tqqivpfirsllmpttgpasipddtlekhtlrsetstynltvgdtgsglivffpgfpgsi
vgahytlqgngnykfdqmlltaqnlpasynycrlvsrsltvrsstlpggvyalngtinav
tfqgslseltdvsynglmsatanindkignvlvgegvtvlslptsydlgyvrlgdpipai
gldpkmvatcdssdrprvytitaaddyqfssqyqpggvtitlfsanidaitslsvggelv
frtsvhglvlgatiyligfdgttvitravaannglttgtdnlmpfnlviptneitqpits
ikleivtsksggqagdqmswsargslavtihggnypgalrpvtlvayervatgsvvtvag
vsnfelipnpelaknlvteygrfdpgamnytklilserdrlgiktvwptreytdfreyfm
evanlnsplkiag

Sequence, based on observed residues (ATOM records):

>d3fbma_ b.121.4.9 (A:) automated matches {Avian infectious bursal disease virus [TaxId: 10995]}
tqqivpfirsllmpttgpasipddtlekhtlrsetstynltvgdtgsglivffpgfpgsi
vgahytlqgngnykfdqmlltaqnlpasynycrlvsrsltvrsstlplngtinavtfqgs
lseltdvsynglmsatanindkignvlvgegvtvlslptsydlgyvrlgdpipaigldpk
mvatcdssdrprvytitaaddyqfssqyqpggvtitlfsanidaitslsvggelvfrtsv
hglvlgatiyligfdgttvitravaannglttgtdnlmpfnlviptneitqpitsiklei
vtsksggqagdqmswsargslavtihggnypgalrpvtlvayervatgsvvtvagvsnfe
lipnpelaknlvteygrfdpgamnytklilserdrlgiktvwptreytdfreyfmevanl
nsplkiag

Timeline for d3fbma_:

• d3fbma_ first appeared in SCOPe 2.04
  
• d3fbma_ appears in SCOPe 2.07