Lineage for d3ebja_ (3ebj A:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1856505Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. 1856506Superfamily c.52.1: Restriction endonuclease-like [52980] (35 families) (S)
  5. 1856940Family c.52.1.34: PA N-terminal domain [254166] (2 protein domains)
    Pfam PF00603; relationship to endonucleases discussed in PubMed 19194458
  6. 1856941Protein PA N-terminal domain [254375] (5 species)
  7. 1856964Species Influenza A virus [TaxId:93838] [254808] (15 PDB entries)
  8. 1856985Domain d3ebja_: 3ebj A: [245817]
    complexed with mg

Details for d3ebja_

PDB Entry: 3ebj (more details), 2.2 Å

PDB Description: Crystal structure of an avian influenza virus protein
PDB Compounds: (A:) Polymerase acidic protein

SCOPe Domain Sequences for d3ebja_:

Sequence, based on SEQRES records: (download)

>d3ebja_ c.52.1.34 (A:) PA N-terminal domain {Influenza A virus [TaxId: 93838]}
lgsmedfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdfhfider
gestiiesgdpnallkhrfeiiegrdrtmawtvvnsicnttgvekpkflpdlydykenrf
ieigvtrrevhtyylekankiksekthihifsftgeematkadytldeesrariktrlft
irqemasrglwdsfrqserg

Sequence, based on observed residues (ATOM records): (download)

>d3ebja_ c.52.1.34 (A:) PA N-terminal domain {Influenza A virus [TaxId: 93838]}
lgsmedfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysrfeiiegr
drtmawtvvnsicnttgvekpkflpdlydykenrfieigvtrrevhtyylekankiksek
thihifsftgeematkadytldeesrariktrlftirqemasrglwdsfrqserg

SCOPe Domain Coordinates for d3ebja_:

Click to download the PDB-style file with coordinates for d3ebja_.
(The format of our PDB-style files is described here.)

Timeline for d3ebja_: