SCOPe 2.06: Domain d3do7b1: 3do7 B:37-226

Lineage for d3do7b1 (3do7 B:37-226)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.5: p53-like transcription factors [49417] (8 families)

5. Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain [81315] (7 proteins)
   automatically mapped to Pfam PF00554

6. Protein automated matches [254629] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [255799] (1 PDB entry)

8. Domain d3do7b1: 3do7 B:37-226 [245651]
   Other proteins in same PDB: d3do7a2, d3do7b2
   automated match to d1a3qa2
   protein/DNA complex

Details for d3do7b1

PDB Entry: 3do7, 3.05 Å

PDB Description: X-ray structure of a NF-kB p52/RelB/DNA complex

PDB Compounds: (B:) Nuclear factor NF-kappa-B p100 subunit

SCOPe Domain Sequences for d3do7b1:

Sequence; same for both SEQRES and ATOM records:

>d3do7b1 b.2.5.3 (B:37-226) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gpylviveqpkqrgfrfrygcegpshgglpgassekgrktyptvkicnyegpakievdlv
thsdpprahahslvgkqcselgicavsvgpkdmtaqfnnlgvlhvtkknmmgtmiqklqr
qrlrsrpqglteaeqreleqeakelkkvmdlsivrlrfsaflrdsdgsfslplkpvisqp
ihdskspgas

Timeline for d3do7b1:

• d3do7b1 first appeared in SCOPe 2.04
  
• d3do7b1 appears in SCOPe 2.05
  
• d3do7b1 appears in SCOPe 2.07
  
• d3do7b1 appears in the current release, SCOPe 2.08