SCOPe 2.08: Domain d3cvqa_: 3cvq A:

Lineage for d3cvqa_ (3cvq A:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.8: TPR-like [48452] (11 families)

5. Family a.118.8.1: Tetratricopeptide repeat (TPR) [48453] (21 proteins)
   this is a repeat family; one repeat unit is 1zb1 A:166-231 found in domain

6. Protein Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) [48462] (2 species)

7. Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [63617] (6 PDB entries)

8. Domain d3cvqa_: 3cvq A: [245563]
   automated match to d3cv0a_
   complexed with gol
   applies to all domains of a family if the common domain is composed of a different number of small repeating units

Details for d3cvqa_

PDB Entry: 3cvq, 3.01 Å

PDB Description: structure of peroxisomal targeting signal 1 (pts1) binding domain of trypanosoma brucei peroxin 5 (tbpex5)complexed to pts1 peptide (7- skl)

PDB Compounds: (A:) Peroxisome targeting signal 1 receptor PEX5

SCOPe Domain Sequences for d3cvqa_:

Sequence, based on SEQRES records:

>d3cvqa_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
ntdypfeannpymyhenpmeeglsmlklanlaeaalafeavcqkepereeawrslgltqa
enekdglaiialnharaldpadiavhaalavshtnehnanaalaslrawllsqpqyeqlg
svnlqadvdiddlnvqsedfffaapneyrecrtllhaalemnpndaqlhaslgvlynlsn
nydsaaanlrravelrpddaqlwnklgatlangnrpqealdaynraldinpgyvrvmynm
avsysnmsqydlaakqlvraiymqvggttptgeasreatrsmwdffrmllnvmnrpdlve
ltyaqnvepfakefg

Sequence, based on observed residues (ATOM records):

>d3cvqa_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
ntdypfeannpymyhenpmeeglsmlklanlaeaalafeavcqkepereeawrslgltqa
enekdglaiialnharaldpadiavhaalavshtnehnanaalaslrawllsqpqyeqlg
svnedfffaapneyrecrtllhaalemnpndaqlhaslgvlynlsnnydsaaanlrrave
lrpddaqlwnklgatlangnrpqealdaynraldinpgyvrvmynmavsysnmsqydlaa
kqlvraiymqvatrsmwdffrmllnvmnrpdlveltyaqnvepfakefg

Timeline for d3cvqa_:

• d3cvqa_ first appeared in SCOPe 2.04
  
• d3cvqa_ appears in SCOPe 2.07