SCOPe 2.08: Domain d3argd1: 3arg D:3-118

Lineage for d3argd1 (3arg D:3-118)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.0: automated matches [191470] (1 protein)
   not a true family

6. Protein automated matches [190740] (31 species)
   not a true protein

7. Species Mouse (Mus musculus) [TaxId:10090] [188198] (836 PDB entries)

8. Domain d3argd1: 3arg D:3-118 [245198]
   Other proteins in same PDB: d3argb_, d3argc2
   automated match to d2nw2b1
   complexed with db6, nag

Details for d3argd1

PDB Entry: 3arg, 3 Å

PDB Description: ternary crystal structure of the mouse nkt tcr-cd1d-alpha- glucosylceramide(c20:2)

PDB Compounds: (D:) Vbeta8.2,Vbeta8.2

SCOPe Domain Sequences for d3argd1:

Sequence, based on SEQRES records:

>d3argd1 b.1.1.0 (D:3-118) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
avtqsprnkvavtggkvtlscnqtnnhnnmywyrqdtghglrlihysygagstekgdipd
gykasrpsqenfslilelatpsqtsvyfcasgdaggnyaeqffgpgtrltvle

Sequence, based on observed residues (ATOM records):

>d3argd1 b.1.1.0 (D:3-118) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
avtqsprnkvavtggkvtlscnqtnnhnnmywyrqdtghglrlihysygagstekgdipd
gykasrpsqenfslilelatpsqtsvyfcasgdaeqffgpgtrltvle

Timeline for d3argd1:

• d3argd1 first appeared in SCOPe 2.04
  
• d3argd1 appears in SCOPe 2.07