SCOPe 2.06: Domain d3afka1: 3afk A:1-158

Lineage for d3afka1 (3afk A:1-158)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families)

5. Family b.29.1.0: automated matches [191363] (1 protein)
   not a true family

6. Protein automated matches [190437] (53 species)
   not a true protein

7. Species Agrocybe aegerita [TaxId:5400] [231694] (18 PDB entries)

8. Domain d3afka1: 3afk A:1-158 [245132]
   Other proteins in same PDB: d3afka2, d3afka3, d3afkb2, d3afkb3
   automated match to d2zgla_
   complexed with thr

Details for d3afka1

PDB Entry: 3afk, 1.95 Å

PDB Description: crystal structure of agrocybe aegerita lectin aal complexed with thomsen-friedenreich antigen

PDB Compounds: (A:) Anti-tumor lectin

SCOPe Domain Sequences for d3afka1:

Sequence; same for both SEQRES and ATOM records:

>d3afka1 b.29.1.0 (A:1-158) automated matches {Agrocybe aegerita [TaxId: 5400]}
qgvniynisagtsvdlaapvttgdivtffssalnlnagagnpnnttlnlfaengayllhi
afrlqenviifnsrqpdgpwlveqrvsdvanqfagidgkamvtvfdhgdkyqvvinektv
iqytkqisgltsslsynateetsifstvveavtytgla

Timeline for d3afka1:

• d3afka1 first appeared in SCOPe 2.04, called d3afka_
  
• d3afka1 was called d3afka_ in SCOPe 2.05
  
• d3afka1 appears in SCOPe 2.07
  
• d3afka1 appears in the current release, SCOPe 2.08