SCOPe 2.08: Domain d2yiae1: 2yia E:3-790

Lineage for d2yiae1 (2yia E:3-790)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members

4. Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families)
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

5. Family e.8.1.0: automated matches [227142] (1 protein)
   not a true family

6. Protein automated matches [226844] (11 species)
   not a true protein

7. Species Infectious pancreatic necrosis virus [TaxId:11002] [226177] (4 PDB entries)

8. Domain d2yiae1: 2yia E:3-790 [244765]
   Other proteins in same PDB: d2yiaa2, d2yiab2, d2yiac2, d2yiad2, d2yiae2, d2yiaf2, d2yiag2, d2yiah2
   automated match to d2yi9a_
   complexed with k

Details for d2yiae1

PDB Entry: 2yia, 3.02 Å

PDB Description: structure of the rna polymerase vp1 from infectious pancreatic necrosis virus

PDB Compounds: (E:) RNA-directed RNA polymerase

SCOPe Domain Sequences for d2yiae1:

Sequence; same for both SEQRES and ATOM records:

>d2yiae1 e.8.1.0 (E:3-790) automated matches {Infectious pancreatic necrosis virus [TaxId: 11002]}
difnspqnkasiltalmksttgdvedvlipkrfrpakdpldspqaaaqflkdnkyrilrp
raiptmveletdaalprlrqmvedgklkdtvsvpegttafypkyypfhkpdhdevgtfga
pditllkqltffllendfptgpetlrqvreaiatlqygsgsysgqlnrllamkgvatgrn
pnktpktvgytneqlaklleqtlpintpkhedpdlrwapswlinytgdlstdksylphvt
ikssaglpyigktkgdttaealvladsfirdlgraatsadpeagvkktitdfwylscgll
fpkgerytqvdwdkktrniwsapypthlllsmvstpvmnesklnitntqtpslygfspfh
ggmdrimtiirdsldndedlvmiyadniyilqdntwysidlekgeanctpqhmqammyyl
ltrgwtnedgsprynptwatfamnvapsmvvdsscllmnlqlktygqgsgnaftflnnhl
mstivvaewvkagkpnpmtkefmdleektginfkierelknlretiveavetapqdgyla
dgsdlppirpgkaveldllgwsaiysrqmemfvpvlenerliasaaypkglenkalarkp
gaeiayqivryeairlvggwnnplletaakhmsldkrkrlevkgidvtgflddwnnmsef
ggdlegitlsepltnqtlvdintpldsfdpkarpqtprspkktldevttaitsgtykdpk
savwrlldqrtklrvstlrdqalalkpasssvdnwaeateelaqqqqllmkannllkssl
tetreale

Timeline for d2yiae1:

• d2yiae1 first appeared in SCOPe 2.04, called d2yiae_
  
• d2yiae1 appears in SCOPe 2.07